Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20luchuensis_20[genbank_20GCA_5F001602395.1_202016-03- 01] 44 sequences; 34,183,795 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq23 109 6e-19 seq6 96.9 4e-15 seq3 86.0 7e-12 >seq23 Length=2392584 Score = 109 bits (120), Expect = 6e-19 Identities = 127/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||| ||| || || | || || |||||||| |||||||| Sbjct 1624623 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAA 1624682 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||||| || | || |||||||||| || | || || | | ||| Sbjct 1624683 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC-TGGATCTTGGTCTTAACGT 1624741 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | || |||||||| || || |||| |||||||| ||||| || Sbjct 1624742 TGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 1624790 Score = 107 bits (118), Expect = 2e-18 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| |||| ||||||||||| || || ||||| || | || || || | Sbjct 1623841 ACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCC 1623900 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||||||||| ||||| |||||||| || | || | || |||||| Sbjct 1623901 ATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTT 1623960 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 || ||| || | |||| | | | || || |||| ||||| || | ||| Sbjct 1623961 ATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTC---TCCACCTCTAGCGT 1624017 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || ||||| || || ||||| || ||||| ||||| Sbjct 1624018 AATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 1624056 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| |||| ||| || || | || || |||||||| || ||||| Sbjct 1624322 TCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAG 1624381 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 ||||| ||||||||||||| || | || |||||||||| ||| | || || || | | Sbjct 1624382 ATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC-TGAATCTTGGTCTTCACATT 1624440 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || ||||| || | ||||| || || || || || ||||| || Sbjct 1624441 GTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCAGGGTCTTGAC 1624500 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| ||||| || | || || || | || || |||||||||||||| || Sbjct 1624094 TCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAAG 1624153 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-T 42136 || | ||||||||||| | || | || ||||||| | ||| | || || | | || | Sbjct 1624154 ATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGT-CTTGAATCTTGGTCTTAACGTT 1624212 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||||| || || | ||||| || || ||||| || ||||| || Sbjct 1624213 ATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGAC 1624272 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 1624273 GAAGATCTGCAT 1624284 >seq6 Length=3633114 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 3226921 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3226862 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || |||||||| || | || | | |||||||||| ||| || |||| ||| | Sbjct 3226861 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 3226803 Query 42139 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 3226802 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 3226743 Query 42198 AA 42199 || Sbjct 3226742 AA 3226741 >seq3 Length=3509466 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| || | ||| |||||| || || ||||| || | ||||| || |||| || Sbjct 1529175 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTC 1529116 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 ||||||||||||||||| || || ||||||||||||| || | | ||||||||| Sbjct 1529115 GAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 1529059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212501232960