Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20luchuensis_20[genbank_20GCA_5F001602395.1_202016-03- 01] 44 sequences; 34,183,795 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq17 125 7e-24 seq23 105 7e-18 seq6 93.3 4e-14 seq2 82.4 8e-11 >seq17 Length=842982 Score = 125 bits (138), Expect = 7e-24 Identities = 344/520 (66%), Gaps = 19/520 (4%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| ||||| | ||||| || ||||||||| || |||| | Sbjct 110619 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAG---GACAGGGAA 110563 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || |||| | || || ||||| || ||||| | || || ||||| Sbjct 110562 TCTACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGT 110503 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 ||| || ||||||| | | || | | || | ||||| || ||||| ||| | Sbjct 110502 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 110443 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG 52562 |||||| | || || || || || || |||||||| ||||| || ||||| | | | Sbjct 110442 AACGAGCTCATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCT-- 110385 Query 52563 ACGCGCGTGACCGAAAAATTGGATTCGGA--CACGATCCTGAG--CATGTTCAAGGAGGC 52618 | | | ||| | || | | | || | | |||| ||| || ||||| Sbjct 110384 -CCCACCTGAAC----AACCGCCCCAGCAAGCAGGTTGTTGAGGACATCATCGTCGAGGC 110330 Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678 || | || || ||||||| | || | ||| ||||| | |||||||||||||| Sbjct 110329 CGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAA 110270 Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738 | | || |||||| ||||||||||||| || ||||| || ||||||||| || || Sbjct 110269 CTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTTGG 110210 Query 52739 GCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 || | | ||||||| |||||| || || || || || ||| | || ||||| | Sbjct 110209 -CAACAAGAAGTACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGG 110151 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| ||||||||||| || |||||||| || || || || Sbjct 110150 CGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTA 110111 >seq23 Length=2392584 Score = 105 bits (116), Expect = 7e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||||||| || ||||| ||||| || || ||||| | | Sbjct 1624091 GATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCA 1624150 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | |||||| |||||||| || || ||||| ||||| ||| | || || |||| Sbjct 1624151 AAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 1624209 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||||| || || || || | || | ||| || || || ||||| || Sbjct 1624210 GTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTT 1624269 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1624270 GACGAAGATCTGCAT 1624284 Score = 82.4 bits (90), Expect = 8e-11 Identities = 112/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || ||||| ||||| || || || || | Sbjct 1624621 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCG 1624680 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| ||||| ||||| || || || ||||| || | || || |||| Sbjct 1624681 AAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC-CTGGATCTTGGTCTTAAC 1624739 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGA 138571 ||| || | ||| ||| ||||||| ||||||| Sbjct 1624740 GTTG-TCGATGGTATCGCTCGACTCGACCTCGA 1624771 >seq6 Length=3633114 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 3226921 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3226862 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||| || ||||| || ||||| || ||||| || | || || || | ||| Sbjct 3226861 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 3226803 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| || || || || || Sbjct 3226802 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGAC 3226744 Query 138603 AAAA 138606 ||| Sbjct 3226743 GAAA 3226740 >seq2 Length=2459003 Score = 82.4 bits (90), Expect = 8e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 57300 GGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC 57359 || || || |||||| | ||| || ||||| ||| || | | | |||||| ||||| Sbjct 820059 GGTCTTGAAGTTGCCAAGGTCACCAACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGT 820118 Query 57360 GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419 ||||| |||||| ||||| || || || |||||||||||| || |||| ||||| Sbjct 820119 CTTGCCGAAGGGGTTGAAGTGAGGACCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAA 820178 Query 57420 CTCGTGAACGTGAAATCC 57437 || ||| ||||| || || Sbjct 820179 CTGGTGGACGTGGAAGCC 820196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262127055680