Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20luchuensis_20[genbank_20GCA_5F001602395.1_202016-03- 01] 44 sequences; 34,183,795 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq41 87.8 1e-12 seq19 84.2 2e-11 >seq41 Length=424085 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/188 (73%), Gaps = 10/188 (5%) Strand=Plus/Plus Query 48504 GAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGC 48563 |||| |||| |||||| | ||||||| ||| | || |||| || |||||||| || Sbjct 229270 GAAGTTCGTGAAGGTGCGCATGAGGACGACCAAGATTCCCCAGATTGGAGACAAGTTCGC 229329 Query 48564 GTC-CTTCACGGCGCAAAAGGGGAC-ATGTGGAGCCGTCCTGACC--CAGGAGGACATGC 48619 || | |||||| |||||||| || || | | | || ||| ||||| ||||||| Sbjct 229330 CTCTCGTCACGGA-CAAAAGGGTACCATCGGTATCA---CTTACCGTCAGGAAGACATGC 229385 Query 48620 CCTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATCAACCCCCACGCCTTTCCCTCC 48678 | ||| ||| || ||| ||||| ||| | ||||||||||| |||||| |||||||| Sbjct 229386 CTTTCACTCGGGAGGGTGTG-TGCCCTGACTTGATCATCAACCCTCACGCCATTCCCTCC 229444 Query 48679 AGGATGAC 48686 | ||||| Sbjct 229445 CGTATGAC 229452 >seq19 Length=939784 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 27498 GTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 27557 ||| || || |||||||| ||||||||||| |||||||| || || ||||| || |||| Sbjct 767595 GTATTCCGCCCCGAAATGTCTCCATTGGAAGCCGTACACGGGCCCTAGGTCGCCGACTTC 767536 Query 27558 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 27617 || |||| || || ||||| | | || | || |||||| |||||||||| || Sbjct 767535 CCGGTGCGAGAGTCCTACTTTGTCGAGGTATTCGCGCGAGCCGTTGCCGTCCCAGATTTT 767476 Query 27618 TACCCC--CTTCTCGGAGAGCT-CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAG 27674 | ||| | || | ||| | | | |||| | ||| || || |||||| || || Sbjct 767475 AATCCCGGCGTCACTGAGGGGTACGGAGGAGGTCGTG---CCGGAGATGAACCAGAGGAG 767419 Query 27675 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 || | | |||||| | ||||| | ||||| || |||||||| Sbjct 767418 TTCGGCGAGGACGGCGCGCAGGAAGACGCGTTTGGTGGTTAGGAGGGG 767371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507001851764