Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq8 138 2e-27 seq5 86.0 1e-11 >seq8 Length=1782630 Score = 138 bits (152), Expect = 2e-27 Identities = 321/478 (67%), Gaps = 16/478 (3%) Strand=Plus/Minus Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGC-- 230237 |||||||||| || | | ||||| |||||| | || ||||| || || ||| Sbjct 104676 AGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGG---TTCCTTCGCTT 104620 Query 230238 -CATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 |||||| ||||| ||| ||| | |||||||| || | || |||||| ||| Sbjct 104619 CCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCA 104560 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || ||| ||||||||||| || || | | |||| | || ||| || | || | Sbjct 104559 TCTCTCGTGACGAGGGTCTGCA-CACCGACTTCGCCTGCCTGTTGTTCTCCCACCT---G 104504 Query 230356 AACAAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAACGAA 230412 ||||| | || | || ||| | | ||||| || || || | | || Sbjct 104503 AACAACCGCCCCAGCAAGCAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGGCATTGAG 104444 Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATG 230472 |||||||| | ||||||| | || ||| || | ||||||||| | | || ||| Sbjct 104443 CAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGCATGAACTCCAAGCTGATG 104384 Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532 | ||||||||||| ||||| || |||||| | || || || || || || |||| Sbjct 104383 TGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTCGGCAACAAGAAGTAC 104324 Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592 |||||| | | |||||||| | || |||||| || ||||| || ||||||||| Sbjct 104323 TACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAAC 104264 Query 230593 TTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAGA 230648 |||||||| ||||| || ||||||| |||| | ||||||| ||| ||| |||||| Sbjct 104263 TTCTTCGAGAAGCGGGTGGGTGACTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGA 104206 >seq5 Length=1940838 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 319453 TCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATC 319512 ||||| ||| ||| ||||| || | |||||||| ||||||||||| || || ||| Sbjct 1388402 TCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGGAAGCCGGAGTCGTGAGAGACGATC 1388343 Query 319513 ACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACA 319572 | | | | || | | || ||||||| || | |||| | ||||| | |||| Sbjct 1388342 AAACTGGTGATATCAGTGTGCTTCTTCAGGTACTCCTGAAGCCACTTGACGTTGGCCACA 1388283 Query 319573 GAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGT 319632 | ||||| || || ||||| || || || | | || || | ||||| ||||| Sbjct 1388282 TCCAAGTGGTTAGTAGGTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAGCATGGCACGC 1388223 Query 319633 GCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 || |||||||| ||||| ||||| |||||||| || Sbjct 1388222 GCCAGAGCGAGCTTCATCTTCCAACCTCCGGACAG 1388188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057814932795470