Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_000871.1 Length=37370 Score E Sequences producing significant alignments: (Bits) Value seq471 134 3e-27 >seq471 Length=578 Score = 134 bits (148), Expect = 3e-27 Identities = 148/188 (79%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 1359 AAAAAAGAGA-CGTTGTTAAACCCCTCTAAAACGCCCGTAGCACGATTTTAAAGCAT-GG 1416 |||| ||||| ||| || | |||||||||||||| ||||||||||||| ||||| || Sbjct 263 AAAAGAGAGAACGTCCATAGAGGCCTCTAAAACGCCCATAGCACGATTTTAGAGCATAGG 322 Query 1417 TGGTATAA-TTACCCTATATGATGTCTAAAATTGACCCCCGCCCTTCCTAGAGGCCT-AG 1474 |||||||| |||||||| | | ||||||||||| ||||||| | || ||| | | Sbjct 323 TGGTATAATTTACCCTAGTGGCTATCTAAAATTGATACCCGCCCCTTATATGGGCGTGTG 382 Query 1475 GAGAGCCACGACAAGGTGTTTTCTTACGTCACGCA-CAATTTTTGAGGATTTTTA-AAGG 1532 ||||||||||||||||| | ||||| |||| | |||||||| | | |||||| |||| Sbjct 383 GAGAGCCACGACAAGGTATCTTCTTGTATCACATACCAATTTTTCAAGTTTTTTATAAGG 442 Query 1533 -GTGTCAT 1539 ||||||| Sbjct 443 TGTGTCAT 450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119461450945896