Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq8 104 3e-17 >seq8 Length=1782630 Score = 104 bits (114), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || ||||| ||| ||| ||||||||||| | | || | |||||||| Sbjct 104514 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 104573 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || || || ||||| || |||||||| || ||||| || ||||| || || || || Sbjct 104574 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 104633 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCG 24302 || |||||||| || || || || || || |||| || | | | | | | Sbjct 104634 GAGAAGAAAATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCC 104693 Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 24340 ||||| || |||||||| ||||||||||||||||| Sbjct 104694 CTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 104731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716635003120