Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19]
669 sequences; 34,880,193 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 7e-17
seq3 100 2e-16
seq2 89.7 4e-13
>seq4
Length=2386931
Score = 102 bits (112), Expect = 7e-17
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 23811 GTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGGGT 23870
||| || ||||| |||||||| ||||| || | ||||| || ||||| ||| || |
Sbjct 1615715 GTTACCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 1615656
Query 23871 GGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 23930
|||||| ||||| ||||||||| |||||||||||| || |||| ||||| | ||| ||
Sbjct 1615655 GGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 1615596
Query 23931 GTGAAAACC 23939
||| || ||
Sbjct 1615595 GTGGAAGCC 1615587
>seq3
Length=2393285
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | || || | || | |||||| |||||||| ||||| ||||| | |
Sbjct 1619530 CCACCACGCAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1619589
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||||||||| || ||||| | || || | ||||||||| ||
Sbjct 1619590 AGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1619649
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||| ||||| | | ||| ||| ||| | ||||
Sbjct 1619650 ATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACC 1619709
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163
|| | ||| |||||||| ||||| | || |||||
Sbjct 1619710 TCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 1619744
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
|||||| || || || | |||||||| |||| |||| |||||| || ||||| |||||
Sbjct 1619070 GTTTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTC 1619129
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| || || | | || |||||||| || || || | || || | |||||| |||
Sbjct 1619130 GGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGG 1619189
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
||| | ||| ||||| || ||||| | || || | | | ||||| | |||
Sbjct 1619190 GGGAATGCCCTCCTTATCTTGAATCTTGTTCTTGACGTTATCAATGGTATCCGAGCTCTC 1619249
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
| |||| ||||| ||||||||||| | || || || || || |||||
Sbjct 1619250 CACCTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300
>seq2
Length=2822020
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | |||||||| || | ||||||||||| || ||||| |||||||
Sbjct 1631954 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1631895
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || ||||||| ||||| || || || | || || | |||||||||| |||
Sbjct 1631894 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1631835
Query 21069 ACGCCTTCCTTGTC 21082
| || ||||||||
Sbjct 1631834 ATACCCTCCTTGTC 1631821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422255757136004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |