Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3 125 6e-24 >seq3 Length=2393285 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| |||||||||||||| |||||||||||| || || | || ||| Sbjct 1619092 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTCC 1619151 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | ||||| || || || || | |||||||| || | Sbjct 1619152 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGA 1619211 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || | ||| || | | | | ||| | ||||||||||| |||||||||||| Sbjct 1619212 ATCTTGTTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTG 1619271 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || ||||||||||| ||||| ||||| Sbjct 1619272 CCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||| || ||||||||||| ||| || | || ||||| || Sbjct 1619553 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTG 1619612 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||| ||||| || | ||||| ||||||||||| | ||||||||||||| ||| || Sbjct 1619613 CTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 1619672 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| | ||||||||| | ||| || ||||| || || Sbjct 1619673 AGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 1619732 Query 45313 CAGAGTCTTCAC 45324 ||| ||||| || Sbjct 1619733 CAGGGTCTTGAC 1619744 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||||||||||||| || || | || |||| || || || || || Sbjct 1619338 TCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAG 1619397 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||| ||||| ||||| || || | || |||||||| ||| || |||||| Sbjct 1619398 ATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTA 1619457 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | || || |||| || |||||||||||||| ||||| || || Sbjct 1619458 TCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACG 1619517 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 1619518 AAGATCTGCAT 1619528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395071978779049