Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 251 6e-62 seq8 127 2e-24 >seq3 Length=2393285 Score = 251 bits (278), Expect = 6e-62 Identities = 439/636 (69%), Gaps = 2/636 (0%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || |||||||| |||| || ||||||||||| || ||||| | Sbjct 276598 TCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGGGCTCTG 276657 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 |||||||| || ||| |||||| | ||||| || || || || |||| ||||| Sbjct 276658 ACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGAAGACATCCGAGTGCCAG 276717 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| ||||| | ||| || || || || | ||| ||||| ||||| || ||||| | | Sbjct 276718 GGCTCAAGGTAGATGGCGAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTG 276777 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||||||| | || | ||||| || || ||||||||||| | ||| | || Sbjct 276778 GCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCG-TTGGTACC 276836 Query 23582 GCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 ||| | || || | | || | | ||| |||| | ||| || || ||| ||| Sbjct 276837 ACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGT 276896 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| ||||| ||||||||||||||||| || || ||||||||||| || Sbjct 276897 CTTGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTT 276956 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | |||| | ||| || || | | || | | ||| ||| | || |||||| || Sbjct 276957 CATGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGT 277016 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 |||| |||||| || ||||| | ||||| | ||||| || |||||||| || Sbjct 277017 CGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTC 277076 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 |||||| ||||| ||||| | ||| || ||||||| || || || || | ||| | Sbjct 277077 AATGTCGCTGCCGTGAATACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGC 277136 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | ||||| || | ||| ||||| || | || || || || || || ||| Sbjct 277137 CACCTTTCCGTTGATCCGCAGCAGGTATGACCGCTCCAAAGTCTTGAAACCGAAGAAGTT 277196 Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 ||||| || ||||| |||| || || ||||| || Sbjct 277197 GTAGTTGAAATCACGGTCGTATACAATAGCCGAGTT 277232 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||||| || ||||| |||||||| | || |||||| | ||| Sbjct 1619528 ATGCAGATCTTCGTCAAAACTCTTACGGGCAAGACGATCACATTGGAAGTTGAATCTTCC 1619469 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | || ||| | | ||||||||||| | || || ||||| Sbjct 1619468 GACACCATCGATAACGTTAAGACCAAGATTCAAG-ACAAGGAAGGCATTCCCCCGGACCA 1619410 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || ||||| || |||||||| || || || ||| || || Sbjct 1619409 GCAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 1619350 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || |||||||| ||||| || || ||| | || | || |||| Sbjct 1619349 CATTCAGAAGGAATCGACCCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 1619300 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || || || |||||| | || || || | || |||| | ||| Sbjct 1619746 TCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACTATCG 1619687 Query 31263 AAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 | | || || || ||| | ||||||||| || | || ||||||||||||||||| Sbjct 1619686 ACAATGTGAAGACTAAGATTCA-GGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTC 1619628 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||| || || ||| |||| || || || || || ||||| ||||| Sbjct 1619627 ATCTTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAG 1619568 Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||||| || || ||| | ||| | || |||| Sbjct 1619567 GAATCCACTCTTCACCTCGTCCTTCGTCTGCGTGGTGGTA 1619528 >seq8 Length=1782630 Score = 127 bits (140), Expect = 2e-24 Identities = 329/495 (66%), Gaps = 20/495 (4%) Strand=Plus/Minus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTC 57965 || ||||||||||| || ||| | ||||| ||||| | | || || | || ||| Sbjct 104737 ATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAG---GACAGGGAATCTACCTTC 104681 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 || || | || | || ||||| ||||| || ||||| ||||| || || ||| || Sbjct 104680 GCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGGTTCCTTCGCT 104621 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| | ||||| || || || ||||| || ||||| || ||||||| | Sbjct 104620 TCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTC 104561 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC 58145 || || || ||||||||||| || || || || || ||||| ||| ||| ||| | Sbjct 104560 ATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTCCCACCT---- 104505 Query 58146 AATAAACCGACGCGGGATCGCATCTT-----GGACATTATCACCGAGGCGGTCGCGATCG 58200 | ||||| | | | | ||| || |||||| ||| |||||| |||| || | Sbjct 104504 GAACAACCGCCCCAGCA-AGCAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGGCATTG 104446 Query 58201 AAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGA 58260 | | ||||| | || || || || || || | || || |||||| | ||| Sbjct 104445 AGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGCATGAACTCCAAGCTGA 104386 Query 58261 TGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCG 58318 ||| ||||||| ||||| || || ||| | || ||| | | || | ||| | Sbjct 104385 TGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTCGGCAACAAGA-AG 104327 Query 58319 TCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGAC 58378 | | |||||| | | || || || || || ||| | ||||||||| | ||| ||||| Sbjct 104326 T-ACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGAC 104268 Query 58379 AAACTTTTTCGAAAA 58393 ||||| ||||| || Sbjct 104267 CAACTTCTTCGAGAA 104253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762672278480