Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3 158 2e-33 seq8 107 3e-18 >seq3 Length=2393285 Score = 158 bits (174), Expect = 2e-33 Identities = 576/898 (64%), Gaps = 8/898 (1%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 |||||||| || || | |||| |||| ||||| ||| | || || | || | | Sbjct 276523 TCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 276582 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || |||| ||| || || ||||| || ||||| || |||| || || || Sbjct 276583 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 276642 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | ||| | || ||| ||||| || || ||||| ||||| |||||| | | Sbjct 276643 AGATCACGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGAAG 276702 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 | ||| | ||||| || || | ||| ||||| | | | || || || ||||| || ||| Sbjct 276703 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCGGGACGCTTGTTGCCACCC 276762 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 || || | |||||| || ||||| || | || | | ||| |||| || ||| ||||| Sbjct 276763 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 276822 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATAT--TACTAATTGATAGAC 66339 ||||| ||||| || || ||| ||| | | ||| || | | || | ||| Sbjct 276823 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCA--GAC 276880 Query 66340 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 66399 | || || || ||| | || ||||| | ||||| || | || || ||||| || | Sbjct 276881 CGATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGATACCGT 276940 Query 66400 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 66459 | || || || ||| |||||| | || || || | | ||| | | ||| | Sbjct 276941 CAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTAC 277000 Query 66460 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 66519 | || || || | || || || ||||| || || | || | ||| | | ||||| | Sbjct 277001 CAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGG 277060 Query 66520 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 66579 |||| || || || || || | ||||| || || || |||||||| | || || Sbjct 277061 TCTCGATGGCCTTCTCAATGTCGCTGCCGTGAATACCAACGGCAACACGCATCAGCAGGT 277120 Query 66580 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 66639 |||| || | ||| | | ||| ||| || || || ||| || |||||||| | Sbjct 277121 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAGCAGGTATGACCGCTCCAAAGTCT 277180 Query 66640 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 66697 | ||||| || ||||||| ||||| || || ||||| | |||| |||||||||||| Sbjct 277181 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 277238 Query 66698 ATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCC 66757 || || ||| ||| || || || |||| || ||||| | | | Sbjct 277239 GTCGGCATGTTTCATAATTATTTCGTATGTCTCCTTTGATATCATCGGTGCAGGAGCATT 277298 Query 66758 ATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 66817 ||||| || |||||||||| | | | ||| || || | || | || || || Sbjct 277299 GTTTTTGGGGTTGACATAGTGGTAGAGATCTGAGATGACCAAAGAGAACTGCTTCTTGGT 277358 Query 66818 TTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGT 66875 | ||||| || || || ||||| || | || || | |||||| ||||| || ||| Sbjct 277359 CTGCTTGTGGAGGTTGGAAACGGCGATACGGGCAGCGAGAATGGCGTAATCAGGGTGT 277416 >seq8 Length=1782630 Score = 107 bits (118), Expect = 3e-18 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || || ||||| ||| ||| ||||||||||| | | || | |||||||| Sbjct 104514 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 104573 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || || ||||| || |||||||| || ||||| || ||||| || || || || Sbjct 104574 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 104633 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCA 36325 || |||||||| || || || || || || |||| || | || | | | | Sbjct 104634 GAGAAGAAAATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCC 104693 Query 36326 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 ||||| || |||||||| ||||||||||||||||| Sbjct 104694 CTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 104731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658167296029960