Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 109 5e-19 seq3 87.8 2e-12 >seq8 Length=1782630 Score = 109 bits (120), Expect = 5e-19 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||||| |||||| | ||||| | || |||||| | ||| | | ||||| Sbjct 104461 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGC 104402 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||| | | |||||||| ||||||||||||| || |||||| | |||||| || Sbjct 104401 ATGAACTCCAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCC 104342 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||| ||||| || || |||||||| || ||| | || ||| Sbjct 104341 CTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCG 104282 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||| || || ||||| ||||||| || ||||| || ||| Sbjct 104281 CTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTGGGTGACTAC 104237 >seq3 Length=2393285 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| | ||| | |||||||| || || ||||| || || || | |||| || || Sbjct 1619848 AACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGGGTGCGGCCATCCTC 1619907 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 ||||| || ||||| |||||||||||||||| |||||||| ||||| || || || | Sbjct 1619908 CAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATC-CT 1619966 Query 139675 GATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 | | || || ||| | | || | || ||| | | ||| ||||| | ||| | |||| Sbjct 1619967 GGATCTTGGTCTTAACATTGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCT 1620026 Query 139734 TGCCGGT 139740 ||||||| Sbjct 1620027 TGCCGGT 1620033 Score = 82.4 bits (90), Expect = 8e-11 Identities = 116/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| |||||||| |||| ||||| |||||||| || || ||||| || || Sbjct 1619146 TCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTA 1619205 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTC-CACTG-TGTCGGTGGGCTCCACCTCAACGGTCA 139727 || ||| | || ||| | | ||| || || | || | | ||||||||| | || | Sbjct 1619206 TCT-TGAATCTT-GTTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAA 1619263 Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||||||| | || || ||||| || |||||| Sbjct 1619264 TCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCATA 1619301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059851664800