Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19]
669 sequences; 34,880,193 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq8 109 5e-19
seq3 87.8 2e-12
>seq8
Length=1782630
Score = 109 bits (120), Expect = 5e-19
Identities = 159/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
|||||||||| |||||| | ||||| | || |||||| | ||| | | |||||
Sbjct 104461 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGC 104402
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
|||||| | | |||||||| ||||||||||||| || |||||| | |||||| ||
Sbjct 104401 ATGAACTCCAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCC 104342
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
||||| | ||| ||||| || || |||||||| || ||| | || |||
Sbjct 104341 CTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCG 104282
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
|| | ||| || || ||||| ||||||| || ||||| || |||
Sbjct 104281 CTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTGGGTGACTAC 104237
>seq3
Length=2393285
Score = 87.8 bits (96), Expect = 2e-12
Identities = 133/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614
||| | ||| | |||||||| || || ||||| || || || | |||| || ||
Sbjct 1619848 AACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGGGTGCGGCCATCCTC 1619907
Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674
||||| || ||||| |||||||||||||||| |||||||| ||||| || || || |
Sbjct 1619908 CAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATC-CT 1619966
Query 139675 GATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733
| | || || ||| | | || | || ||| | | ||| ||||| | ||| | ||||
Sbjct 1619967 GGATCTTGGTCTTAACATTGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCT 1620026
Query 139734 TGCCGGT 139740
|||||||
Sbjct 1620027 TGCCGGT 1620033
Score = 82.4 bits (90), Expect = 8e-11
Identities = 116/158 (73%), Gaps = 4/158 (3%)
Strand=Plus/Plus
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| |||||||| |||| ||||| |||||||| || || ||||| || ||
Sbjct 1619146 TCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTA 1619205
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTC-CACTG-TGTCGGTGGGCTCCACCTCAACGGTCA 139727
|| ||| | || ||| | | ||| || || | || | | ||||||||| | || |
Sbjct 1619206 TCT-TGAATCTT-GTTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAA 1619263
Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||||||||||| | || || ||||| || ||||||
Sbjct 1619264 TCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCATA 1619301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496059851664800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |