Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq8 82.4 8e-11 >seq8 Length=1782630 Score = 82.4 bits (90), Expect = 8e-11 Identities = 163/239 (68%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 50619 GGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGT 50678 |||||| || || ||||||| ||| || | ||||| | || |||||| | ||| Sbjct 104474 GGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTG 104415 Query 50679 GGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAG 50738 || | ||||||||||| | | |||||||| ||||||| ||||| || || ||| | Sbjct 104414 TGCTCTCCTGGGCATGAACTCCAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCG 104355 Query 50739 ATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTA 50797 ||||| || || || |||| ||| ||||| || || |||||||| || | Sbjct 104354 CCTGTTGGTGGCCCTCGG-CAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCA 104296 Query 50798 TGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 || | || ||| ||| ||| || || ||||| ||||| | || || || || ||| Sbjct 104295 TGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTGGGTGACTAC 104237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507010160092080