Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8 141 1e-28 >seq8 Length=1782630 Score = 141 bits (156), Expect = 1e-28 Identities = 297/435 (68%), Gaps = 21/435 (5%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || ||||| ||||| ||||| || ||||| || ||| || || ||||||| Sbjct 104671 CTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 104612 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || |||||||| || ||||| | |||||| | || ||||| Sbjct 104611 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 104552 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604 |||||||| || ||| ||||| ||| || |||| || || || | | | ||| Sbjct 104551 GACGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTCCCACCTGAACAACCGCCCC 104492 Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 || | ||| | || ||| ||||| | | ||| ||||| | || || | Sbjct 104491 AG----CAAGCAG-GTTGTTGAGGACATCATCGT------CGAGGCCGTCGGCATTGAGC 104443 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATG 125723 | ||||| || || || | || || | || | | |||||||||| |||||| ||| Sbjct 104442 AGGAGTTCCTGACTGACGCTCTGCC-CTGTGCTCTCCTGGGCATGAACTCCAAGCTGATG 104384 Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA-- 125781 ||| ||||||| ||||| || || || || |||| | | | ||| ||||| Sbjct 104383 TGCCAGTACATCGAGTTCGTCGCGGACCG---CCTGTTGGTGGCCCTCGGCAACAAGAAG 104327 Query 125782 -TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840 |||||||||| || ||||| || |||||| || || || | |||||||||| Sbjct 104326 TACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACC 104267 Query 125841 AACTTTTTCGAGAAG 125855 ||||| ||||||||| Sbjct 104266 AACTTCTTCGAGAAG 104252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741053002892440