Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 >seq4 Length=2386931 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197 || ||| || || || |||||||| ||||| || | |||||||| ||||| | | | Sbjct 1615718 GAAGTTACCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGC- 1615660 Query 21198 CGTAGGG-TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256 || |||| || ||||| ||| ||||| |||||||||||| || |||| ||||||| || Sbjct 1615659 CGAAGGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGT 1615600 Query 21257 GAACGTGAAAGCC 21269 | ||||| ||||| Sbjct 1615599 GGACGTGGAAGCC 1615587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414569419806586