Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq3 102 5e-17 >seq3 Length=2393285 Score = 102 bits (112), Expect = 5e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 ||||| || || || || ||||| || ||||| | | || ||||| ||||| ||| Sbjct 1619332 GTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCA 1619391 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTT 33292 ||| || ||||| |||||||||| ||| |||||||| || || |||| || || Sbjct 1619392 GCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTG-GTCTT 1619450 Query 33293 ACTGTT-TGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGT 33351 | ||| | || |||||| | || ||| |||| || ||||| || ||||||||||| Sbjct 1619451 AACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGT 1619510 Query 33352 TTTTACGAAAATTTGCAT 33369 ||| ||||| || ||||| Sbjct 1619511 TTTGACGAAGATCTGCAT 1619528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318775000866762