Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 4e-12 >seq3 Length=2393285 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| || || || || |||||||| || || | || || Sbjct 1619544 AAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATC 1619603 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||| || || || || | ||| || || ||||| || || || || || Sbjct 1619604 CTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTC 1619663 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || ||||| || | || || || || ||||| || || || || Sbjct 1619664 CTGAATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGT 1619723 Query 104527 CTTACCAGTAAGTGTTTTTAC 104547 ||| || || || || || || Sbjct 1619724 CTTTCCGGTCAGGGTCTTGAC 1619744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151388530716652