Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq310 636 4e-178 >seq310 Length=999 Score = 636 bits (704), Expect = 4e-178 Identities = 408/445 (92%), Gaps = 0/445 (0%) Strand=Plus/Plus Query 31471 AGCCATGAGGAAACGAACGTTTGAACTAAGAAGCCCAATTCATCAGCAGAACGCCATTCA 31530 || ||||| |||| ||| |||||| | || ||| |||||||| ||||| ||||| Sbjct 277 AGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAACGCTATTCA 336 Query 31531 AGCTATCCAGCAAATTCTTCCAGACCCAATCAAACCAATCGTAGTAACCATTCAGGAACG 31590 || | |||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 337 CGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAACCATTCAGGAACG 396 Query 31591 CAACCGCAGCTTAGACCAGAATCGAAAGCTTTGGGCTTGCCTTGGTGACGTCTCTCGTCA 31650 |||||||||||||||||| || | ||||| ||||| ||| | ||||||||||||||||| Sbjct 397 CAACCGCAGCTTAGACCAAAACAGGAAGCTATGGGCCTGCTTAGGTGACGTCTCTCGTCA 456 Query 31651 GGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGCGTTTTTACAGCAGC 31710 ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct 457 GGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTTACCGCAGC 516 Query 31711 ATTAAAGCAGCAGGACGTTGTTCCTAACCTTGCCGGGAATGGCTTTGTGGTAATAGGCCA 31770 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 517 ATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAATGGCTTTGTGGTAATAGGCCA 576 Query 31771 GTCAACCAGCAGGATGCGTGTAAGCGAATTTGCGGAGCTATTAGAGCTTATACAGGCATT 31830 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 577 GTCAACCAGCAGGATGCGTGTAGGCGAATTTGCGGAGCTATTAGAGCTTATACAGGCATT 636 Query 31831 CGGTACAGAGCGTGGCGTTAAGTGGTCAGACGAAGCGAGACTGGCTCTGGAGTGGAAAGC 31890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 637 CGGTACAGAGCGTGGCGTTAAGTGGTCAGACGAAGCGAGACTGGCTCTGGAGTGGAAAGC 696 Query 31891 GAGATGGGGAGATCGGGCTGCATGA 31915 |||||||||||| ||||||||||| Sbjct 697 GAGATGGGGAGACAGGGCTGCATGA 721 Score = 134 bits (148), Expect = 3e-27 Identities = 76/77 (99%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 30315 GATGACCATCTACATAACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 30374 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 203 GATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 262 Query 30375 TTGGGGGAGAGGGAAGT 30391 ||||||||||||||||| Sbjct 263 TTGGGGGAGAGGGAAGT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124815008414890