Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_005841.1 Length=41391 Score E Sequences producing significant alignments: (Bits) Value seq310 762 0.0 >seq310 Length=999 Score = 762 bits (844), Expect = 0.0 Identities = 480/518 (93%), Gaps = 3/518 (1%) Strand=Plus/Plus Query 17535 ATGACCATCTACATCACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 17594 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 204 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 263 Query 17595 TGGGGGAGAGGGAAGACATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGC 17654 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 264 TGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGC 323 Query 17655 AAAATGCCATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAA 17714 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 324 AAAACGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAA 383 Query 17715 CCATTCAGGAACGCAACCGCAGCTTAGACCAAAATCGGAAGCTTTGGGCTTGCCTTTGTG 17774 |||||||||||||||||||||||||||||||||| ||||||| ||||| ||| | ||| Sbjct 384 CCATTCAGGAACGCAACCGCAGCTTAGACCAAAACAGGAAGCTATGGGCCTGCTTAGGTG 443 Query 17775 ATGTCTCACGTCAGGTTAACTGGCATGGACGATGGCTTGACGCTGAAAGCTGGAAGTGTG 17834 | ||||| ||||||||| | |||||||| || ||||| || || |||||||||||||||| Sbjct 444 ACGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTG 503 Query 17835 TGTTTACCGCGGCATTAAAGCAGCAGGACGTTGTTCCTAACCTTGCCGGGAATGGCTTTG 17894 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 504 TGTTTACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAATGGCTTTG 563 Query 17895 TGGTAATAGGCCAGTCAACCAGCAGGATGCGTGTAAGCGAATTTGCGGAGCTATTAGAGC 17954 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 564 TGGTAATAGGCCAGTCAACCAGCAGGATGCGTGTAGGCGAATTTGCGGAGCTATTAGAGC 623 Query 17955 TTATACAGGCATTCGGTACAGAGCGCGGCGTTAAGTGGTCAGACGAAGCCCGGTTAGCAC 18014 ||||||||||||||||||||||||| ||||||||||||||||||||||| | | || | Sbjct 624 TTATACAGGCATTCGGTACAGAGCGTGGCGTTAAGTGGTCAGACGAAGCGAGACTGGCTC 683 Query 18015 TGGAATGGAAAGCGAGGTTTGGAGAC---GCCGCATGA 18049 |||| ||||||||||| | |||||| || |||||| Sbjct 684 TGGAGTGGAAAGCGAGATGGGGAGACAGGGCTGCATGA 721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132328548724034