Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 3e-14 >seq21 Length=600870 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/196 (73%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTC-GGGCACCACCCCGTCCTT 71477 ||||| | |||||||| |||||| ||||||||||| ||||| ||||| ||| || ||| Sbjct 170792 GTCATACGGGAGGGAATGGCGTGAGGGTTGATGATCAGGTCAGGGCA-CACACCCTCCCG 170850 Query 71478 GTCGAAGGGCATGTCCTCCTG--GGTCAG-GACAGCTCCGCATGTCCCCTTTTGCGCCGT 71534 ||| |||||||| ||||| ||| || || | ||| || |||||||| |||| Sbjct 170851 AGTGAAAGGCATGTCTTCCTGGCGGTAAGTGATA---CCGATGGTACCCTTTTG-TCCGT 170906 Query 71535 GA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593 || || || |||||||| || |||| || | ||| ||||||| | |||||| | Sbjct 170907 GACGAGAGGCGAACTTGTCTCCAATCTGGGGAATCTTGGTCGTCCTCATGCGCACCTTCA 170966 Query 71594 CGAGCTTCTTGCCATC 71609 ||| |||| | |||| Sbjct 170967 CGAACTTCAGGTCATC 170982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338762037902376