Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=2393285 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || |||||||| || | ||| || ||| || || | |||||||| ||| || || Sbjct 1619332 GTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCA 1619391 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| || | ||||| || || ||||| ||||| ||||| | ||| || | ||| Sbjct 1619392 GCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTA 1619451 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| ||| ||||| | || || || | ||||| || || || ||||||||| Sbjct 1619452 ACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGTT 1619511 Query 94991 TTCACAAAGATCTGCAT 95007 || || ||||||||||| Sbjct 1619512 TTGACGAAGATCTGCAT 1619528 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| ||||||||||| | ||| || || || || | |||||||||||| Sbjct 1619553 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTG 1619612 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 ||||| | ||||| | | ||||| || ||||| ||||| || ||||| | ||| || Sbjct 1619613 CTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 1619672 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 | ||| || | ||| |||||||| || || |||| |||||||| ||||| || Sbjct 1619673 AGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 1619732 Query 94984 AAGAGTTTTCAC 94995 || || || || Sbjct 1619733 CAGGGTCTTGAC 1619744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448287451164840