Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq310 783 0.0 >seq310 Length=999 Score = 783 bits (868), Expect = 0.0 Identities = 485/518 (94%), Gaps = 3/518 (1%) Strand=Plus/Plus Query 40769 ATGACTATCTACATCACTGAGCTTGTAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 40828 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 204 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 263 Query 40829 TGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGC 40888 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 264 TGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGC 323 Query 40889 AAAATGCCATTCACGCAGTACAGCAAATCCATCCAGACCCAACCAAACCAATCGTAGTAA 40948 |||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 324 AAAACGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAA 383 Query 40949 CTATTCAGGAGCGCAACCGCAGCTTAGACCAAAATCGGAAGCTTTGGGCCTGCTTAGGTG 41008 | |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct 384 CCATTCAGGAACGCAACCGCAGCTTAGACCAAAACAGGAAGCTATGGGCCTGCTTAGGTG 443 Query 41009 ACGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGCG 41068 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 444 ACGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTG 503 Query 41069 TGTTTACCGCAGCCTTAAAGCAGCAGGATGTTGTCCCTAACCTTGCCGGGAATGGCTTCG 41128 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 504 TGTTTACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAATGGCTTTG 563 Query 41129 TGGTAATAGGCCAGTCAACCAGCAGGATGCGTGTAAGCGAGTTTGCGGAGCTATTAGAGC 41188 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 564 TGGTAATAGGCCAGTCAACCAGCAGGATGCGTGTAGGCGAATTTGCGGAGCTATTAGAGC 623 Query 41189 TTATACAGGCATTCGGTACAGAGCGCGGCGTTAAGTGGTCAGACGAAGCCCGGTTAGCAC 41248 ||||||||||||||||||||||||| ||||||||||||||||||||||| | | || | Sbjct 624 TTATACAGGCATTCGGTACAGAGCGTGGCGTTAAGTGGTCAGACGAAGCGAGACTGGCTC 683 Query 41249 TGGAATGGAAAGCGAGGTTTGGAGAC---GCCGCATGA 41283 |||| ||||||||||| | |||||| || |||||| Sbjct 684 TGGAGTGGAAAGCGAGATGGGGAGACAGGGCTGCATGA 721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149957208674236