Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 188 9e-43 seq8 125 9e-24 >seq3 Length=2393285 Score = 188 bits (208), Expect = 9e-43 Identities = 583/898 (65%), Gaps = 8/898 (1%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||||||| || || | |||| |||| ||||| ||| | || || | || | | Sbjct 276523 TCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 276582 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || |||| ||| || || ||||| || ||||| || |||| || || || Sbjct 276583 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 276642 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 ||||| | || ||| ||||| || || ||||| ||||| |||||| | | Sbjct 276643 AGATCACGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGAAG 276702 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||| || ||||| || || | ||| ||||| | | | || || || ||||| || ||| Sbjct 276703 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCGGGACGCTTGTTGCCACCC 276762 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | |||||| || ||||| || | || | | ||| |||| || |||||| || Sbjct 276763 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 276822 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGATAGAC 63495 |||| |||||||| || ||| ||| | | ||| || | | || | ||| Sbjct 276823 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCA--GAC 276880 Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCT 63555 | || || || ||| | || ||||| | ||||| || | ||||| |||||||| | Sbjct 276881 CGATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGATACCGT 276940 Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615 | ||||| || || |||||| | || || || | | ||| | | ||| | Sbjct 276941 CAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTAC 277000 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63675 | || || || | || || || ||||| || || | || | ||| | | ||||| | Sbjct 277001 CAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGG 277060 Query 63676 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735 |||| || || || || || | ||||| || || || |||||||| | || || Sbjct 277061 TCTCGATGGCCTTCTCAATGTCGCTGCCGTGAATACCAACGGCAACACGCATCAGCAGGT 277120 Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795 |||| || | ||| | | ||| ||| || || || ||| || |||||||| | Sbjct 277121 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAGCAGGTATGACCGCTCCAAAGTCT 277180 Query 63796 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 63853 | ||||| || ||||||| ||||| || || ||||| | |||| |||||||||||| Sbjct 277181 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 277238 Query 63854 ATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCC 63913 || || ||| ||| ||| || || |||| || ||||| | | | Sbjct 277239 GTCGGCATGTTTCATAATTATTTCGTATGTCTCCTTTGATATCATCGGTGCAGGAGCATT 277298 Query 63914 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 63973 ||||| || || ||||||| | | | ||| || || | || | || || || Sbjct 277299 GTTTTTGGGGTTGACATAGTGGTAGAGATCTGAGATGACCAAAGAGAACTGCTTCTTGGT 277358 Query 63974 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031 | |||||| || || || ||||| || | ||| || |||||||| ||||| || ||| Sbjct 277359 CTGCTTGTGGAGGTTGGAAACGGCGATACGGGCAGCGAGAATGGCGTAATCAGGGTGT 277416 >seq8 Length=1782630 Score = 125 bits (138), Expect = 9e-24 Identities = 159/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || ||||| ||| ||||||||||||||| | | || || |||||||| Sbjct 104514 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 104573 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || || ||||| || |||||||| || ||||| || ||||||||||| || || Sbjct 104574 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 104633 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 33471 || ||||| || || || || ||||| || |||| || | || | | | | Sbjct 104634 GAGAAGAAAATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCC 104693 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 ||||| || |||||||| ||||||||||||||||| Sbjct 104694 CTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 104731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941990604040