Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8 132 5e-26 seq3 114 1e-20 seq2 93.3 4e-14 >seq8 Length=1782630 Score = 132 bits (146), Expect = 5e-26 Identities = 334/501 (67%), Gaps = 9/501 (2%) Strand=Plus/Minus Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157 |||||| |||| ||||| || ||||||||| | ||| | || ||||| |||| Sbjct 104732 CAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCTACCTTCGCTCAGCG 104673 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | | || || || || || ||||| | || || || || || || ||||||| Sbjct 104672 TCTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTT 104613 Query 46218 TTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | |||| || | || | ||||||| || ||||| || ||||||||| || || | Sbjct 104612 CTGGCTCAAGAAGCGTGGTC-TCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTC 104554 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 | |||||||| ||||| || ||||| || || || | | | | | | || || || Sbjct 104553 GTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTT---CTCCCACCTGAACAACC 104497 Query 46337 AGCTTGCGCCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGA 46394 || || | || || |||| ||| || ||||| || | ||||||| |||| Sbjct 104496 -GCCCCAGCAAG-CAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGA 104439 Query 46395 GTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGA 46454 ||| | || | ||| |||||| ||| || |||||||||||| | || |||||| | Sbjct 104438 GTTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGCATGAACTCCAAGCTGATGTGCCA 104379 Query 46455 CTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCA 46514 ||||||||||| || |||||||| ||| | ||| || | | |||| | | | Sbjct 104378 GTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTCGGCAACAAGAAGTACTACAA 104319 Query 46515 CGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTT 46574 ||| ||| || || || || ||| | ||||| |||| ||| || || || || || Sbjct 104318 CGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTT 104259 Query 46575 CGAAAAGCGCGTCGGCGAGTA 46595 ||| ||||| || || || || Sbjct 104258 CGAGAAGCGGGTGGGTGACTA 104238 >seq3 Length=2393285 Score = 114 bits (126), Expect = 1e-20 Identities = 419/642 (65%), Gaps = 17/642 (3%) Strand=Plus/Plus Query 145853 TATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTG 145912 || ||| |||||| | || ||| | ||||||| ||| | || ||| || | | Sbjct 276505 TACTTCTCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 276564 Query 145913 TTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGC 145972 ||||| || | ||| | ||| | ||||| || | || |||| ||| |||| ||| || Sbjct 276565 TTGGGGCAGAACAGAGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGG 276624 Query 145973 ACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTC 146032 |||||| ||||| | || || || ||| || ||||| ||| || ||| | | Sbjct 276625 GTCCACAGGGCGTAGAACAGATCACGGGCTCTGACCTCCTCCTTACCG-TGGTTCT-TAC 276682 Query 146033 --AAATTAAGCACACTATA-GATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCT 146089 | || || | ||| | || |||| |||||| || |||| |||| ||||| || Sbjct 276683 GGAGATCCAGGA-ACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCA 276741 Query 146090 CCTTTTCGTTTG---CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACC 146146 || || ||| ||||||||||| |||| | | ||||||| ||||| || | | Sbjct 276742 CCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGC 276801 Query 146147 ATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGC 146206 || || | | ||| ||| ||||| ||| || || ||| || || Sbjct 276802 ATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGG 276861 Query 146207 ACGCAATGAACATTCACGCCGAGACCGCC-GCCGTACTTGGATATAGCGGCGC-AGTCGC 146264 | || || || |||| |||| ||| || ||||| |||||| || |||| |||| Sbjct 276862 ATGCGGTGCACGTTCAGACCGATACCACCGGCCGT-CTTGGAGATCATAGCGCAAGTCTT 276920 Query 146265 CGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGAATGCCGAGCAGAAAGCACGA 146322 | || || |||||||| ||||||||||| || |||| ||| ||| || ||||| || Sbjct 276921 C-AGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTC--ATGTCGACGAGGAAGCAAGA 276977 Query 146323 GCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACAT 146382 | | ||| | | || || || || ||||| |||||| ||||| || || Sbjct 276978 GGCAAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTA 277037 Query 146383 TTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCC 146442 || | ||||| || || ||||| || | | ||||||| ||| ||||| || Sbjct 277038 CTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGAATACC 277097 Query 146443 CAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCAC 146484 | || || ||||| |||| ||| ||||| ||||| ||||| Sbjct 277098 AACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCAC 277139 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | |||||| ||||| ||||||||||| ||| | Sbjct 1619302 CCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAC 1619361 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| | |||||| || || |||| ||||||||||||||||| || Sbjct 1619362 AAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGA 1619421 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | || |||| || || | Sbjct 1619422 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAACT 1619481 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || |||||||| ||||| |||||||| Sbjct 1619482 TCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | || || |||||||| |||||||| || | Sbjct 1619530 CCACCACGCAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1619589 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| |||| | |||||||||||| |||||| Sbjct 1619590 AGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1619649 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | ||| || | ||||| | Sbjct 1619650 ATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACC 1619709 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | ||| || ||||| || || || |||| Sbjct 1619710 TCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 1619746 >seq2 Length=2822020 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||||| || |||||||| || Sbjct 1631954 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1631895 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| | ||||||||||||||| ||| Sbjct 1631894 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1631835 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 1631834 ATACCCTCCTTGTC 1631821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008852792960