Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19]
669 sequences; 34,880,193 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq8 132 5e-26
seq3 114 1e-20
seq2 93.3 4e-14
>seq8
Length=1782630
Score = 132 bits (146), Expect = 5e-26
Identities = 334/501 (67%), Gaps = 9/501 (2%)
Strand=Plus/Minus
Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157
|||||| |||| ||||| || ||||||||| | ||| | || ||||| ||||
Sbjct 104732 CAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCTACCTTCGCTCAGCG 104673
Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217
| | || || || || || ||||| | || || || || || || |||||||
Sbjct 104672 TCTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTT 104613
Query 46218 TTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276
| |||| || | || | ||||||| || ||||| || ||||||||| || || |
Sbjct 104612 CTGGCTCAAGAAGCGTGGTC-TCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTC 104554
Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336
| |||||||| ||||| || ||||| || || || | | | | | | || || ||
Sbjct 104553 GTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTT---CTCCCACCTGAACAACC 104497
Query 46337 AGCTTGCGCCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGA 46394
|| || | || || |||| ||| || ||||| || | ||||||| ||||
Sbjct 104496 -GCCCCAGCAAG-CAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGA 104439
Query 46395 GTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGA 46454
||| | || | ||| |||||| ||| || |||||||||||| | || |||||| |
Sbjct 104438 GTTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGCATGAACTCCAAGCTGATGTGCCA 104379
Query 46455 CTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCA 46514
||||||||||| || |||||||| ||| | ||| || | | |||| | | |
Sbjct 104378 GTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTCGGCAACAAGAAGTACTACAA 104319
Query 46515 CGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTT 46574
||| ||| || || || || ||| | ||||| |||| ||| || || || || ||
Sbjct 104318 CGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTT 104259
Query 46575 CGAAAAGCGCGTCGGCGAGTA 46595
||| ||||| || || || ||
Sbjct 104258 CGAGAAGCGGGTGGGTGACTA 104238
>seq3
Length=2393285
Score = 114 bits (126), Expect = 1e-20
Identities = 419/642 (65%), Gaps = 17/642 (3%)
Strand=Plus/Plus
Query 145853 TATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTG 145912
|| ||| |||||| | || ||| | ||||||| ||| | || ||| || | |
Sbjct 276505 TACTTCTCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 276564
Query 145913 TTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGC 145972
||||| || | ||| | ||| | ||||| || | || |||| ||| |||| ||| ||
Sbjct 276565 TTGGGGCAGAACAGAGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGG 276624
Query 145973 ACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTC 146032
|||||| ||||| | || || || ||| || ||||| ||| || ||| | |
Sbjct 276625 GTCCACAGGGCGTAGAACAGATCACGGGCTCTGACCTCCTCCTTACCG-TGGTTCT-TAC 276682
Query 146033 --AAATTAAGCACACTATA-GATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCT 146089
| || || | ||| | || |||| |||||| || |||| |||| ||||| ||
Sbjct 276683 GGAGATCCAGGA-ACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCA 276741
Query 146090 CCTTTTCGTTTG---CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACC 146146
|| || ||| ||||||||||| |||| | | ||||||| ||||| || | |
Sbjct 276742 CCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGC 276801
Query 146147 ATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGC 146206
|| || | | ||| ||| ||||| ||| || || ||| || ||
Sbjct 276802 ATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGG 276861
Query 146207 ACGCAATGAACATTCACGCCGAGACCGCC-GCCGTACTTGGATATAGCGGCGC-AGTCGC 146264
| || || || |||| |||| ||| || ||||| |||||| || |||| ||||
Sbjct 276862 ATGCGGTGCACGTTCAGACCGATACCACCGGCCGT-CTTGGAGATCATAGCGCAAGTCTT 276920
Query 146265 CGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGAATGCCGAGCAGAAAGCACGA 146322
| || || |||||||| ||||||||||| || |||| ||| ||| || ||||| ||
Sbjct 276921 C-AGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTC--ATGTCGACGAGGAAGCAAGA 276977
Query 146323 GCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACAT 146382
| | ||| | | || || || || ||||| |||||| ||||| || ||
Sbjct 276978 GGCAAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTA 277037
Query 146383 TTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCC 146442
|| | ||||| || || ||||| || | | ||||||| ||| ||||| ||
Sbjct 277038 CTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGAATACC 277097
Query 146443 CAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCAC 146484
| || || ||||| |||| ||| ||||| ||||| |||||
Sbjct 277098 AACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCAC 277139
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | |||||| ||||| ||||||||||| ||| |
Sbjct 1619302 CCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAC 1619361
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| | |||||| || || |||| ||||||||||||||||| ||
Sbjct 1619362 AAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGA 1619421
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | || | || |||| || || |
Sbjct 1619422 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAACT 1619481
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || |||||||| ||||| ||||||||
Sbjct 1619482 TCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | || || |||||||| |||||||| || |
Sbjct 1619530 CCACCACGCAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1619589
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| |||||||| || ||| |||| | |||||||||||| ||||||
Sbjct 1619590 AGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1619649
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | ||| || | ||||| |
Sbjct 1619650 ATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACC 1619709
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|| | ||| | ||| || ||||| || || || ||||
Sbjct 1619710 TCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 1619746
>seq2
Length=2822020
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| | || | ||| |||||||| || |||||||| ||
Sbjct 1631954 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1631895
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| |||| | ||||||||||||||| |||
Sbjct 1631894 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1631835
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 1631834 ATACCCTCCTTGTC 1631821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472008852792960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |