Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=2393285 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| |||||||| ||||||||||| | || ||| | | ||||||| || Sbjct 1619554 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGC 1619613 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || ||||| | || || ||||| ||||| ||| | ||||| ||||| ||| | Sbjct 1619614 TTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTA 1619673 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | |||||| | |||| || | ||||||||| ||||||||| Sbjct 1619674 GTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTC 1619733 Query 16913 AGCGTTTTGAC 16923 || || ||||| Sbjct 1619734 AGGGTCTTGAC 1619744 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || || ||||| || ||||||||||||| || ||| | | |||||||| || Sbjct 1619326 TGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGC 1619385 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851 || || ||| | || | ||||| |||||| || | ||| || ||||| ||| ||| Sbjct 1619386 TTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTG 1619445 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | ||| || | | | |||||| | || ||||| ||||| || || || || Sbjct 1619446 GT-CTTAACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGT 1619504 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 || |||||||| || |||||||| Sbjct 1619505 AAGAGTTTTGACGAAGATCTGCAT 1619528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405084697140310