Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq14 116 2e-21 >seq14 Length=841641 Score = 116 bits (128), Expect = 2e-21 Identities = 198/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||| ||||| ||| |||| || ||||| | ||||| ||||| |||||||| Sbjct 493752 TTCTACCGTTACAAGATGGAGCGCCTCCAGTCCAAGATTGAGGGCAAGGGCAACGGTATC 493693 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || ||||| | |||||| || |||||| || ||||| | |||||| | | ||| Sbjct 493692 AAGACCGTTGTCGTCAACTTGAACTCGGTCGCTCAGTCGCTCAGTCGCCCTCCGTCTTAC 493633 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || || || | ||| || || |||||| | | | | || | || Sbjct 493632 GTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAACGCCAAGCCCACCGATGAT 493573 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||| ||| | ||||| | ||| | | ||||||| ||||||| || ||||||||| Sbjct 493572 CGCTGGATCATCAACGGTGCCCATGATGCCCCCAAGCTTCAGGACTATCTGGACGGCTTT 493513 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || |||||| |||||||| | ||||| | || ||||| || || Sbjct 493512 ATCTCCAAGTTCGTGCTGTGCAAGAAATGCAAGAATCCGGAAACGGA 493466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944469028939