Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 7e-12 >seq8 Length=1782630 Score = 86.0 bits (94), Expect = 7e-12 Identities = 340/522 (65%), Gaps = 20/522 (4%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| || ||||| || || || || || ||||| || ||||| || | Sbjct 104219 CATGACACCAGCCTTCTGGTAGTCACCCACCCGCTTCTCGAAGAAGTTGGTCTTACCCGC 104278 Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCA---CC 92904 || || ||||| | || | || || || || ||||||| || ||||| | || Sbjct 104279 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 104338 Query 92905 GATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACA 92964 || | | ||| | | || || || || || |||||||| |||||| | | Sbjct 104339 GAGGGCCAC---CAACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTGGA 104395 Query 92965 ATTCATTCCTAGAAGACGTACAGGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA 93023 ||||| || || ||| | ||||| |||||||| |||| ||| || | ||| || | | Sbjct 104396 GTTCATGCCCAGGAGA-GCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGA 104454 Query 93024 CGGCTTCTTTCAAGATTTCTATTACT--CTACTATTTGGTGGTTTTTGTACGACATAATT 93081 |||| || | ||| || || || || ||| || |||| | | | Sbjct 104455 CGGCCTCGACGATGATGTCCTCAACAACCTGCTTGCTGG-GGCGGTTGTTC-AGGTGGGA 104512 Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 | ||| | ||| || |||||||| || | ||| ||||| || || || | ||| ||| Sbjct 104513 GAACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGA 104572 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| || | ||| || | || || || ||||||||||| || || ||||| || ||| Sbjct 104573 GAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACC 104632 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || || || ||||| || ||||| || || || || | ||| | || || | || Sbjct 104633 GGAGAAGAAAATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAA---GGTAGA 104689 Query 93262 ATTACTG--CT-GATCCATTTTAAAGCCCAATCGGCTTTTTT 93300 | ||| || |||||| || | ||||||||||| || || Sbjct 104690 TTCCCTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 104731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856143251560