Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 150 4e-31 seq4 127 4e-24 >seq8 Length=1782630 Score = 150 bits (166), Expect = 4e-31 Identities = 277/402 (69%), Gaps = 8/402 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| ||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 104256 TCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 104315 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || || | |||||| || || ||||| | Sbjct 104316 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAACAGGCGGTCCGCGACGAACTCGATG 104375 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||| | | | ||| || | || ||| | | Sbjct 104376 TACTGGCACATCAGCTTGGAGTTCATGCCCAGGAGAGCACAGGGCAGAGCGTCAGTCAGG 104435 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798 || |||| || || | || ||||| | | || ||| ||||| | | | | Sbjct 104436 AACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTCCTCAACAACCTGCTTGCTGGGG 104495 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | | ||||| ||| | ||| ||| || | | || | ||||||||||||||| Sbjct 104496 C-GGTTGTT---CAGGTGGGAGAACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTC 104551 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| ||||| ||||||||| | ||| |||||||| | ||||| ||| ||||||| Sbjct 104552 ACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCA 104611 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 |||||| | ||||| || ||||| | | |||||| || Sbjct 104612 GAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCAAC 104653 >seq4 Length=2386931 Score = 127 bits (140), Expect = 4e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || || |||| ||||||||||| ||| Sbjct 1881606 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAAC 1881547 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||| ||||| | |||||||||| | || || ||||| |||| ||||| || | Sbjct 1881546 CAGACCAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC 1881487 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| |||||| ||||| ||||| |||| ||||| || || || || || Sbjct 1881486 GGTAAGACCACTCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 1881427 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 |||||| | ||| || || || ||||||||| Sbjct 1881426 GATGAGGTCAAGACCGTCTACGTTGAGCACGAC 1881394 Score = 89.7 bits (98), Expect = 1e-12 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| || || || ||| ||||| | ||| | | || || Sbjct 1880202 CACTCCCGCATGCGCGGTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTTGCCGCCTGC 1880143 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 ||| ||||| | |||||||| |||||||| ||||||||||| ||||| |||||||| || Sbjct 1880142 TCT-TGGCAGCGTCCTCACGTCATCGTTCTGGACGAGCCTACTAACTACCTGGACCGTGA 1880084 Query 280823 GAGCCTGGGCGCTCTG 280838 || || |||||| Sbjct 1880083 CTCTCTCGGTGCTCTG 1880068 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || || || ||||| ||||||||||||||||| || | || ||| | | | | || Sbjct 1881246 TCCCTCTCCGGTGGATGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTGTTCGAGTCTCCC 1881187 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 ||| |||| ||||| || ||||| ||||||||| ||||| || ||||| |||||| | Sbjct 1881186 GATATCCTGCTGCTCGACGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCCTGGTTG 1881127 Query 279822 GTGTCCTACCT 279832 | | |||||| Sbjct 1881126 GAGAACTACCT 1881116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027827989832629