Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq8 159 6e-34 seq3 158 2e-33 seq1 120 6e-22 seq4 113 8e-20 seq5 95.1 2e-14 >seq8 Length=1782630 Score = 159 bits (176), Expect = 6e-34 Identities = 319/470 (68%), Gaps = 6/470 (1%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || ||||| |||||||||||||| ||| ||| | Sbjct 104219 CATGACACCAGCCTTCTGGTAGTCACCCACCCGCTTCTCGAAGAAGTTGGTCTTACCCGC 104278 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || || |||||||||||| |||||||| |||| | | ||| || || Sbjct 104279 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 104338 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | |||||| || ||||||||||||||||||| |||||| | ||||| Sbjct 104339 GAGGGCCACCAACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTGGAGTT 104398 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | ||||| | ||||| | ||| |||| || || |||| || Sbjct 104399 CATGCCCAGGAGAGCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGC 104458 Query 10175 TTCCTCGACGATGCTCTTTACCACGT-CAAG--GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || ||| |||| || || || | | | || | |||||| || | || | Sbjct 104459 CTCGACGATGATGTCCTCAACAACCTGCTTGCTGGGGCGGTTGTTC---AGGTGGGAGAA 104515 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 || || | || | ||| || |||||||| || ||||| ||||||||| || Sbjct 104516 CAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAA 104575 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 |||||| |||||||| || || || |||||||| |||| ||| || ||||| Sbjct 104576 GGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGA 104635 Query 10352 GAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 ||| | || |||||| ||| | | || ||||| |||| ||||||| Sbjct 104636 GAAGAAAATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGG 104685 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || ||||||||| | | || ||||| |||| | ||| ||||||| Sbjct 104963 AGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGGAGATGAAG 105022 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||| || |||||||| | |||| || || ||||| | || | | | Sbjct 105023 TAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAATCGTGCAAATCCTTGGAAAGATCAATC 105082 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||||| ||| ||||||||||||||||||| Sbjct 105083 TCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTG 105126 >seq3 Length=2393285 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || || || || || ||||| || ||||| Sbjct 1619302 CCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAC 1619361 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || |||||||| || || || || | | || ||||| || ||| Sbjct 1619362 AAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGA 1619421 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||||||||| | ||| ||| ||||||||||| | ||||| ||| Sbjct 1619422 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAACT 1619481 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || ||||| || || |||||||| |||||||| Sbjct 1619482 TCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528 Score = 147 bits (162), Expect = 4e-30 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| ||||| || || || || | |||| ||| || ||| ||| || |||||||| || Sbjct 1619067 TTAGTTTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTA 1619126 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 |||||||| || | |||||||| | |||||| || ||||| ||||| | || || || Sbjct 1619127 GTCGGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATC 1619186 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || |||||||| ||||| ||||||||||| ||||||| || ||||| || | Sbjct 1619187 CGGGGGAATGCCCTCCTTATCTTGAATCTTGTTCTTGACGTTATCAATGGTATCCGAGCT 1619246 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| || || || || || ||||| ||||| ||||| |||||||| Sbjct 1619247 CTCCACCTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 145 bits (160), Expect = 1e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || ||||||||||| || || || Sbjct 1619530 CCACCACGCAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1619589 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| ||||| | || |||||||| || Sbjct 1619590 AGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1619649 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| | ||| || ||||| ||||| | || || || Sbjct 1619650 ATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACC 1619709 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | ||||||||| ||||| || ||||||||||||| || Sbjct 1619710 TCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGACTA 1619749 >seq1 Length=3905891 Score = 120 bits (132), Expect = 6e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 455432 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 455491 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || || || || || || || |||||||| || ||||| | ||||||| ||| Sbjct 455492 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 455551 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || |||||||||||||||||||| Sbjct 455552 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 455610 >seq4 Length=2386931 Score = 113 bits (124), Expect = 8e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 || || | |||||| || ||||| || ||| || || | | |||||| ||||| Sbjct 1881386 GCATCCAAGTCGTGCTCAACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCA 1881445 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 ||||| | || || ||||| | || || |||| || | |||||||| |||| Sbjct 1881446 AGCTGCTCGTTGTTGATGGCACGCATGAGAGTGGTCTTACCGGTACCGTTGGGGCCGAGC 1881505 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949 || |||||| | | || ||||||| | ||||| || |||||| || |||||| || Sbjct 1881506 AGACCGTAACGCTGACCACGCTTGAGGCGGAGGCTGGTCTGGTTCAGCAGAATCTTGGCA 1881565 Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 || ||||| |||||||| ||| | |||||| |||||||||||||| Sbjct 1881566 CCGTAGGCCAGGGAGAAAGTGCAGTTGCACAGATCCTCACCCTCCTC 1881612 >seq5 Length=1940838 Score = 95.1 bits (104), Expect = 2e-14 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 225410 TTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGAC 225469 |||| |||||| || || ||| ||| ||| | || |||||||| |||||||| || Sbjct 1388408 TTCTGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGGAAGCCGGAGTCGTGAGAG 1388349 Query 225470 ACAATGA---TGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGA-GCCATGCCAC 225525 || || | ||| || | | || | ||| |||| | | ||| |||| || Sbjct 1388348 ACGATCAAACTGGT-GATA--TCAGTGTGCTTCTTCAGGTAC-TCCTGAAGCCACTTGAC 1388293 Query 225526 GTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAG 225585 |||| || |||| |||||| |||||||||||||| || |||| ||| || | || Sbjct 1388292 GTTGGCCACATCCAAGTGGTTAGTAGGTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAG 1388233 Query 225586 GATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCC 225636 ||||| |||| |||| |||||||| ||||| || |||||||||||||| Sbjct 1388232 CATGGCACGCGCCAGAGCGAGCTTCATCTTCCAACCTCCGGACAGGGAGCC 1388182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921614692932680