Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq8 242 7e-59 seq3 242 7e-59 >seq8 Length=1782630 Score = 242 bits (268), Expect = 7e-59 Identities = 374/524 (71%), Gaps = 25/524 (5%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| |||||||| || ||||| |||| |||||| || || | || Sbjct 104743 CCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCTACC 104684 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| || | || || || || | ||||| ||||| || |||||||| || ||||| Sbjct 104683 TTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGGTTCCTTC 104624 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || |||||||||||||||||| || ||| || ||||| || || |||||||| ||||| Sbjct 104623 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGCCTGGTCTGACCTTCTCCAACGA 104565 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 |||||| | |||||||| ||||| | ||||| |||||||| ||||||| ||| Sbjct 104564 GCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTC---CCA 104508 Query 42872 CCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 ||| | |||| |||| | ||| || || || ||||||| |||||||| | Sbjct 104507 CCT---GAACAACCGCCCCAGCAAGCAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGG 104451 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACG 42987 || ||| |||||||||| || | | |||||| ||| | || | ||||||||| | Sbjct 104450 CATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTG-CTCTCCTGGGCATGAACTCCA 104392 Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047 | || |||||| |||||||| ||| |||||| ||| | ||||| | ||| ||| Sbjct 104391 AGCTGATGTGCCAGTACATCGAGTTCGTCGCGGAC---CGCCTGT---TGGTGGCCCTCG 104338 Query 43048 GCCGC------CTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101 || | ||||||| | | |||||||||||| |||||| |||||| ||| Sbjct 104337 GCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGG 104278 Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||| ||||||||||| ||||||||||| || | ||||||||| Sbjct 104277 CGGGTAAGACCAACTTCTTCGAGAAGCGGGTGGGTGACTACCAG 104234 >seq3 Length=2393285 Score = 242 bits (268), Expect = 7e-59 Identities = 1115/1759 (63%), Gaps = 96/1759 (5%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| || ||||||| | || | ||||||||||||||| ||||| Sbjct 275319 ACGGTGAACTGGATGGGCGCAGAGGCGGCCATTGTGCGCAGGTAGTACATGCCCGTCTTC 275378 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || | ||| || | ||||||| || | ||| ||| || ||| Sbjct 275379 AGACCCATCTTCCAACCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCT----- 275433 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||| ||| || |||||||||||| |||||| | ||| | | || || Sbjct 275434 ----CCTT---CAGGTGGATGTTGAGGGACTGAGACTGGTCAATGAACGCACCACGGTCC 275486 Query 243917 GCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 |||||||| | || || | ||| || ||||| || |||||||||| | | ||| Sbjct 275487 GCGGCCATCTGCAGGATCGTGCG-CTGGGAGATCTCCCACACCGTCTTGTACAGCGCCTT 275545 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || ||||| ||||||||| || || || | | |||| || | Sbjct 275546 GATGTCACTGGGGATGTTGGGGATGTTCTGGACGGAACCACCCTCAGCAATGATGCGGTT 275605 Query 244036 GCGCATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCA 244094 |||||| || ||||||||| | | || |||| ||| | ||| ||| | Sbjct 275606 CTTCATGTTGTCCGACCACAGGCCGAGATCGA-CCAGGTCCTTCAGCAGCCAGGGGTTGA 275664 Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154 ||||||| ||||| || | || || ||||| ||||| |||| | || ||||||| Sbjct 275665 CCACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGA 275724 Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214 || ||| || ||||| ||||| || || ||||| |||||||| | ||||||| Sbjct 275725 AGCACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGAGCGACCAGCA 275784 Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274 ||||| | || || ||||| ||| | || || | ||||||| | Sbjct 275785 AGCTGTTGCGGACACCAG---TCTGG--GCGATCT-TGGCCTTGAGGGAGTCCCA---GT 275835 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334 || ||||||| | | || || |||||||||| |||| || | |||| | ||| | Sbjct 275836 CCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGGATACCCTGGGAGACAG 275895 Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGA 244394 | |||||||||||| ||| | ||| || ||| || | | | || | Sbjct 275896 GAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCAAGATCAGACGAGGCGGTCA 275955 Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454 | |||| ||||||||||||||||||| |||||| | | ||||| | | || Sbjct 275956 AACCAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTCAGCTGTCTGGCCTCGGCCGAGT 276015 Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 |||||| | || || | ||| | || ||||| || | || || | | |||| Sbjct 276016 CGAAGGGCAGGCGCAGAGCGAGGAAAGCATCAGCCAGACCGTTGACACCCAGAGCAATGG 276075 Query 244515 GTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCA 244574 | | ||| || |||||| | |||| || || |||||||| ||||| |||||| | Sbjct 276076 GACGGTGACGGAAGTTGGACTTCTTGGCCTCCGGGACGGGGTAGTAGTTGATGTCGATGA 276135 Query 244575 CCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACT 244634 |||||| | ||| ||| | | |||| || ||| ||| |||||| |||| Sbjct 276136 TCTTGTTCAAGTTACGGACCAAGACCTGGACAACCTCGTGGAGCTTGCCAAAGTCATACT 276195 Query 244635 CGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGT 244694 || | || | || ||| | ||| | | || || | || |||| Sbjct 276196 CGCCGCGAGCAGCGTCGACG-----------AAAGTAGGC-AGAGCAAGAGACGCAAGGT 276243 Query 244695 TGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGC 244754 | ||||| || ||||| |||| |||||| | |||||||||||||||||| || Sbjct 276244 TACAGACAGCAACCTCATCCGGAGCACTGTACTCAATAATCTCGGTGCAGAGGTTGGAGC 276303 Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCA 244814 |||||| || |||| || || ||| ||| |||||| || |||||||| |||| Sbjct 276304 TACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCA 276363 Query 244815 TGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCT 244874 ||||||| || |||||| ||| || | || | || ||| || | | ||||| Sbjct 276364 TGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCACAGCTTCTGAGCCT 276423 Query 244875 TGACCGTCCTGCGA-----GCCTTGCC-CTC-----TGC----CTCGTAGC--GGGT--- 244914 ||| || | || ||||| | ||| ||| || |||| |||| Sbjct 276424 TGATGGTACGACGGCCACGGCCTTCCTTCTCATACCTGCAATACTATTAGCATGGGTCGC 276483 Query 244915 -----------------------------GTACAGGGCCTCGAACTCGGGGCCCCAGACC 244945 ||| || || |||||||| || |||| Sbjct 276484 GAATACGCGGACCGGCAAACTTACTTCTCGTAGAGAGCGTCGAACTCATCACCGTAGACA 276543 Query 244946 TCGTCTAGGCC-GGGGCA-CGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGA 245003 || | | ||| ||||| || | ||||| | ||| |||| || ||| ||| | Sbjct 276544 TCAGCCAAGCCAGGGGCTTCGTTG--GGGCAGAACAGAGTCCAGTCACCGTTCGCCTCAA 276601 Query 245004 CCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG-- 245061 | | || |||||| || || ||| |||| ||||| | ||| || || | || ||||| Sbjct 276602 CACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGGG--CTCTGAC 276659 Query 245062 CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGG 245121 ||| ||| || |||||| | || |||| || || ||||| || ||||||||| Sbjct 276660 CTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGAAGACATCCGAGTGCCAGGG 276719 Query 245122 CTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTC 245181 ||| | ||||| |||| || ||||| ||||||||||| |||||||| || || | Sbjct 276720 CTCAAGGTAGATGGCGAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGC 276779 Query 245182 GAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCT 245240 || | |||||||| || || |||| || | ||||| ||| |||||||| || Sbjct 276780 -AGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCAC 276838 Query 245241 TGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCT 245300 ||||||| ||| | | || | | | | || || | || ||||| || Sbjct 276839 CAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCT 276898 Query 245301 TGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCA 245360 ||||||| | ||||| |||| | ||||| || || || ||||||||| ||||| Sbjct 276899 TGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCA 276958 Query 245361 TGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGG 245420 ||| || || ||||| |||| |||||||||| ||| | | | |||||||||||| | Sbjct 276959 TGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCG 277018 Query 245421 GGCTGGCGTGGGTAAAGTA 245439 || |||||| || ||||| Sbjct 277019 GGGAGGCGTGAGTGAAGTA 277037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944331302963440