Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 2e-15 seq5 86.0 1e-11 seq4 86.0 1e-11 >seq8 Length=1782630 Score = 98.7 bits (108), Expect = 2e-15 Identities = 306/471 (65%), Gaps = 12/471 (3%) Strand=Plus/Minus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 || ||| |||||||||| || | | |||||| |||||| | || ||||| || | Sbjct 104683 TTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGG---TTCC 104627 Query 243349 TGCGC---CATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 | ||| |||||| ||||| ||| ||| | |||||||| || | || ||| Sbjct 104626 TTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAAC 104567 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| ||||| ||| |||||||| || ||| | |||| || ||| || | Sbjct 104566 GAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTCCCAC 104507 Query 243466 CTCCAGAACAAGCTACCATTCGAAACGGTCA---AACAAATCATCACAGAAGCAGTTGAA 243522 || |||||| | || | | ||| | | |||||| || || || | Sbjct 104506 CT---GAACAACCGCCCCAGCAAGCAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGGC 104450 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | || |||| ||| | |||||| | || || || | ||||||||||| | Sbjct 104449 ATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGCATGAACTCCAAG 104390 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 || ||| | ||||||||||| ||||| || |||||| | || | || || || | || Sbjct 104389 CTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTCGGCAACAAG 104330 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || |||||| ||| |||||||| | ||| |||||| || ||||| || || Sbjct 104329 AAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAG 104270 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 || ||||||||||| ||||| || |||| || || ||||||| ||| Sbjct 104269 ACCAACTTCTTCGAGAAGCGGGTGGGTGACTACCAGAAGGCTGGTGTCATG 104219 >seq5 Length=1940838 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 333777 TCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATC 333836 ||||| ||| ||| ||||| || | |||||||| ||||||||||| || || ||| Sbjct 1388402 TCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGGAAGCCGGAGTCGTGAGAGACGATC 1388343 Query 333837 ACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACA 333896 | | | | || | | || ||||||| || |||||| | ||||| | |||| Sbjct 1388342 AAACTGGTGATATCAGTGTGCTTCTTCAGGTACTCCTGAAGCCACTTGACGTTGGCCACA 1388283 Query 333897 GAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGT 333956 | ||||| || || ||||| || || || | | || || | ||||| ||||| Sbjct 1388282 TCCAAGTGGTTAGTAGGTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAGCATGGCACGC 1388223 Query 333957 GCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 || |||||||| ||||| ||||| ||||| || || Sbjct 1388222 GCCAGAGCGAGCTTCATCTTCCAACCTCCGGACAG 1388188 >seq4 Length=2386931 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| | || || | ||||| |||||| || |||||||| || Sbjct 1881395 TCGTGCTCAACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTCG 1881454 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 || || || ||||| ||||| | ||||| | ||||| || || ||||||||| Sbjct 1881455 TTGTTGATGGCACGCATGAGAGTGGTCTTACCGGTACCGTTGGGGCCGAGCAGACCGTAA 1881514 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 || | |||||||| || || | || | |||||| ||||| || |||| || ||| Sbjct 1881515 CGCTGACCACGCTTGAGGCGGAGGCTGGTCTGGTTCAGCAGAATCTTGGCACCGTAGGCC 1881574 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || || | |||||||||||||| Sbjct 1881575 AGGGAGAAAGTGCAGTTGCACAGATCCTCACC 1881606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102870546595150