Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq1 96.9 4e-15 >seq3 Length=2393285 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||| |||| ||||||||||| || || ||||| || | || || || | Sbjct 1619085 ACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCC 1619144 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||||||||| ||||| |||||||| || | || | || |||||| Sbjct 1619145 ATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTT 1619204 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 || || || | |||| | | | || || |||| ||||| || | ||| Sbjct 1619205 ATCTTGAATCTTGTTCTTGACGTTATCAATGGTATCCGAGCTC---TCCACCTCCAGCGT 1619261 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || ||||| || || ||||| || ||||| ||||| Sbjct 1619262 AATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| |||| ||| || || | || || |||||||| || ||||| Sbjct 1619566 TCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAG 1619625 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 ||||| ||||||||||||| || | | |||||||||| ||| | || || || | | Sbjct 1619626 ATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC-TGAATCTTAGTCTTCACATT 1619684 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || ||||| || | |||||||| || || || || ||||| || Sbjct 1619685 GTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 1619744 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| ||||| || | || || || | || || | |||||||||||| || Sbjct 1619338 TCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAG 1619397 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-T 42136 || | ||||||||||| | || | || ||||||| | ||| | || || | | || | Sbjct 1619398 ATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGT-CTTGAATCTTGGTCTTAACGTT 1619456 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||||| || || | ||||| || |||||||| || || || || Sbjct 1619457 ATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGAC 1619516 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 1619517 GAAGATCTGCAT 1619528 >seq1 Length=3905891 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 455430 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 455489 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || |||||||| || | || | | |||||||||| ||| || |||| ||| | Sbjct 455490 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 455548 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 455549 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 455608 Query 42198 AA 42199 || Sbjct 455609 AA 455610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543208257382960