Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 203 3e-47 >seq3 Length=2393285 Score = 203 bits (224), Expect = 3e-47 Identities = 435/646 (67%), Gaps = 8/646 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||| | ||||| ||| ||||| ||| ||||| || ||| | || Sbjct 277202 AACTACAACTTCTTCGGTTTCAAGACTTTGGAGCGGTCATACCTGCTGCGGATCAACGGA 277143 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||||| || || || ||||||||||| || ||| | || ||||||||| | Sbjct 277142 AAGGTGGCTGAGCGTCCCCAGCACCTGCTGATGCGTGTTGCCGTTGGTATTCACGGCAGC 277083 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891 ||||| ||| | | | | | || || || | ||| ||| || Sbjct 277082 GACATTGAGAAGGCCATCGAGACCTACA---ACTTGATGTCTCAGAAGTACTTCACTCAC 277026 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| ||||||| ||||||||||| || || || ||| ||| | | || || ||||| Sbjct 277025 GCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCAGCCCCAGCTTGCCTCTTGCTTCCTC 276966 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | ||| | |||| ||| ||| ||| || | ||||| || ||| || || | Sbjct 276965 GTCGAC-ATGAAGGAGGACAGCATTGACGGTATCTACGACACTCTGAAGACTTGCGCTAT 276907 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || || || || ||||| | | || ||| | | ||| | | || || Sbjct 276906 GATCTCCAAGACGGCCGGTGGTATCGGTCTGAACGTGCACCGCATCCGTTCTACTGGCTC 276847 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| | |||||||| || ||||||||||| || || |||||||| || |||||||| Sbjct 276846 CTACATTGGTGGTACCAACGGTACCTCCAACGGTCTTGTTCCTATGCTTCGTGTCTTCAA 276787 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || | ||||| ||||||||||| | | | ||| ||||||| |||| Sbjct 276786 CAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTCGCCATCTA 276727 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 || |||||||||||| |||| || | ||| | || || || ||||||||||| || Sbjct 276726 CCTTGAGCCCTGGCACTCGGATGTCTTCGAGTTCCTGGATCTCCGTAAGAACCACGGTAA 276667 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || || ||| | || || |||||||| || ||| || || || || ||||| Sbjct 276666 GGAGGAGGTCAGAGCCCGTGATCTGTTCTACGCCCTGTGGACCCCGGATCTGTTCATGAA 276607 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 || || ||| ||| | ||||| ||| || || ||||| ||| Sbjct 276606 GCGTGTTGAGGCGAACGGTGACTGGACTCTGTTCTGCCCCAACGAA 276561 Score = 140 bits (154), Expect = 3e-28 Identities = 605/942 (64%), Gaps = 36/942 (4%) Strand=Plus/Minus Query 94452 GAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTT 94511 |||||||||| | || |||| | ||| ||||| |||| |||| ||| ||| Sbjct 276416 GAAGCTGTGGTACGCTATTCTGGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTGTA 276357 Query 94512 CAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAA 94571 |||||| || |||| ||| ||||||| || ||||||| ||| ||||| || Sbjct 276356 CAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGCTCCAA 276297 Query 94572 TCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGG 94631 || |||||||||||| | ||||| | | ||||||| ||| ||||||| |||||||| | Sbjct 276296 CCTCTGCACCGAGATTATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGTAACCTTGC 276237 Query 94632 CTCCATCAACCTGTCCACTTTCGTGCGA-GATGCCTACA-CGTCTACTGCTTCGTTCGAT 94689 || | ||| | |||||||| ||| | ||| | || || ||| | | | Sbjct 276236 GTCTCTTGCTCTGCCTACTTTCGT-CGACGCTGCTCGCGGCGAGTATGACTTTGG-CAAG 276179 Query 94690 CTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGAC 94749 || | ||| |||| | || ||||| ||| |||||| | | |||||| Sbjct 276178 CTCCACGAGGTTGTCCAGGTCT---------TGGTCCGTAACTTGAACAAGATCATCGAC 276128 Query 94750 AAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGC 94809 | |||| |||||||||||||||||| |||| || ||| | || || ||||| | Sbjct 276127 ATCAACTACTACCCCGTCCCGGAGGCCAAGAAGTCCAACTTCCGTCACCGTCCCATTGCT 276068 Query 94810 ATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTC 94869 | || ||| | ||| | || || || | | |||| ||||||| |||||| | | Sbjct 276067 CTGGGTGTCAACGGTCTGGCTGATGCTTTCCTCGCTCTGCGCCTGCCCTTCGACTCGGCC 276008 Query 94870 GACGC--GGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGAAAC 94927 || || | | | | ||| | | || ||||| | ||| || ||| | ||| Sbjct 276007 GAGGCCAGACAGCT--GAACATCCAGATCTTCGAGACCATCTACCACGCTGGTTTGACCG 275950 Query 94928 AATCCGTCCACT-TGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCC 94986 || ||| | | |||| ||| ||| | |||| | | | ||||| || Sbjct 275949 CCTC-GTCTGATCTTGCCAA---GGAGTTCGGAACTTACGAGACCTACGAGGGATCTCCT 275894 Query 94987 TTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGAC 95046 | ||||| || |||||| |||| | |||| | ||| | | || | ||| Sbjct 275893 GTCTCCCAGGGTATCCTTCAGTACGACATGTGGGACCGCACTCCCACTGACCTCTGGGAC 275834 Query 95047 TGGGAAGCTCTACGCGCTGATGTTATCAAACAC-GGTGTGAAAAACGCGCTGCTTGTGGC 95105 ||||| | || || | | | | | || ||||| ||| |||| || || Sbjct 275833 TGGGACTCCCTCAAGGCCAA-GATCGCCCAGACTGGTGTCCGCAACAGCTTGCTGGTCGC 275775 Query 95106 CCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTT 95165 ||||||||||| ||| || |||||| | ||| |||||||| ||||| || | Sbjct 275774 TCCCATGCCCACTGCCAGTACCAGTCAGATCTTGGGCTTCAACGAGTGCTTCGAGCCTTA 275715 Query 95166 CACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCA 95225 |||||||||| | ||| | | || || | || || || |||| || ||||| Sbjct 275714 CACCTCCAACATCTACTCCCGCCGTGTCTTGGCTGGTGAGTTCCAGGTGGTCAACCCCTG 275655 Query 95226 CCTCCTACGGGACCTGACGTC--TCTGGGTGTGTGGGGTGACAAGGTCAAGAACCA---- 95279 || || ||||||| ||| ||| || ||||| ||||| | ||||||| Sbjct 275654 GCTGCTGAAGGACCTG--GTCGATCTCGGCCTGTGGTCGGACAACATGAAGAACCGCATC 275597 Query 95280 ACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGC 95339 | |||| | | || ||||||||||||||||| | || || ||||||||||| Sbjct 275596 ATTGCTGAGGGT----GGTTCCGTCCAGAACATCCCCAACATCCCCAGTGACATCAAGGC 275541 Query 95340 GCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACT 95381 ||| |||||||| |||||||||||| | |||||| ||| || Sbjct 275540 GCTGTACAAGACGGTGTGGGAGATCTCCCAGCGCACGATCCT 275499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719062877240