Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3 116 3e-21 >seq3 Length=2393285 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || |||||||| || || || || ||| Sbjct 1619299 ATACCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCG 1619358 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| ||||| || || || || | ||||| || ||||||||||| Sbjct 1619359 GACAAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGG 1619418 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || ||||||| | || || | | || | || | |||||||||||| || Sbjct 1619419 GGAATGCCTTCCTTGTCTTGAA-TCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTC 1619477 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || | ||| ||||| || |||||||| || || || ||||| Sbjct 1619478 AACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 |||| || ||||| | | ||| || ||||| || ||||| ||||| || || ||| Sbjct 1619072 TTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGG 1619131 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 || || ||| |||| || || || ||| | || | || ||||| ||||| | Sbjct 1619132 AGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGG 1619191 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290 ||||||| || ||||||||||| || | |||| || | || | ||| || || ||| Sbjct 1619192 GAATGCCCTCCTTATCTTGAATCTTGTTCTTGA-CGTTATCAATGGTATCCGAGCTCTCC 1619250 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| ||| |||||||| ||||| || || || || ||||| Sbjct 1619251 ACCTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 86.0 bits (94), Expect = 6e-12 Identities = 190/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 122889 ATCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTG 122948 ||| | | |||||| || || ||| || || |||| ||||| || || | || | Sbjct 277151 ATCAACGGAAAGGTGGCTGAGCGTCCCCAGCACCTGCTGATGCGTGTTGCCGTTGGTATT 277092 Query 122949 CACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTC 123008 ||||| ||||||| || || || | ||| || ||| | ||||||||||| || | ||| Sbjct 277091 CACGGCAGCGACATTGAGAAGGCCATCGAGACCTACAACTTGATGTCTCAGAAGTACTTC 277032 Query 123009 ACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGT 123068 || ||||| || ||| ||||| ||| || || ||| ||| | | || || Sbjct 277031 ACTCACGCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCAGCCCCAGCTTGCCTCTTGC 276972 Query 123069 TTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGC 123128 || | || | || || |||||||| ||||||||| || ||| || |||| Sbjct 276971 TTCCTCGTCGACATGAAGGAGGACAGCATTGACGGTATCTACGACACTCTGAAGACTTGC 276912 Query 123129 GCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCAC 123173 || |||| ||||| | ||| || || || ||||||||||| Sbjct 276911 GCTATGATCTCCAAGACGGCCGGTGGTATCGGTCTGAACGTGCAC 276867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999420123240