Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8 131 2e-25 seq3 93.3 5e-14 >seq8 Length=1782630 Score = 131 bits (144), Expect = 2e-25 Identities = 307/458 (67%), Gaps = 18/458 (4%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || |||||||||||||||||||| ||||| || | || ||| |||||| Sbjct 104237 GTAGTCACCCACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCAT 104296 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 127344 || || || ||||| | | ||| | |||||| | | | | | | Sbjct 104297 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AA 104350 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || || |||| |||| |||| ||||||| ||||| || |||||||| || | ||| Sbjct 104351 CAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTGGAGTTCATGCCCAGGAG 104410 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 ||| || || ||||| | |||| ||| ||||||| | || || || | ||| Sbjct 104411 AGCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGAT 104470 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCA--CAG-C 127521 | | | || | | | | || | ||| | | || | ||| || ||| | Sbjct 104471 GTCCTCAACAACCTGCTTGCTGGGGCGGTTGT-TCAGGTG--GGAGAACAACAGGCAGGC 104527 Query 127522 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 127581 || || ||| |||||||||||||| |||||||| || || |||||| |||||| || Sbjct 104528 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGG 104587 Query 127582 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 127641 ||||||||| |||||||| | |||||| || | | || || || |||||||| || || Sbjct 104588 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACC 104647 Query 127642 CTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||| || ||||| |||| ||||||| || |||| Sbjct 104648 CTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGG 104685 >seq3 Length=2393285 Score = 93.3 bits (102), Expect = 5e-14 Identities = 456/718 (64%), Gaps = 16/718 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||| ||||| |||||||| ||| |||||||| || || | Sbjct 275700 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 275759 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || ||||||||||| || | || | ||||||||||| ||| | || || Sbjct 275760 GCAGTGGGCATGGGAGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 275819 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 ||||||| ||||||||| || | | | | |||||||| || |||| ||| Sbjct 275820 TTGAGGGAGTCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 275879 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 ||||| ||||| | || |||||||| | ||||| || | || ||| || | Sbjct 275880 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCAAGA 275939 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGC 116201 || || || | | ||||| || || ||||| || || | |||| || Sbjct 275940 TCAGACGAGGCGGTCAAACCAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 275999 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGACCTT 116260 || ||||||| | || || || | || || || | | || |||| || ||||| | Sbjct 276000 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCG-CAGAGCGAGGAAAGCATCAGCCAGACCGT 276057 Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGG 116317 |||||| || |||| || || || | | || ||||| || |||| |||| Sbjct 276058 TGACACCCAGAGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGG 276114 Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377 | || | || | ||||| | | | || | || | | |||| | || | Sbjct 276115 GGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACAACCTCGT 276174 Query 116378 GAAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 116434 | ||||| | | ||| | | ||||| | || ||| | |||| || || | Sbjct 276175 GGAGCTTGCCAAAGTCATACTCGCCGCGAGCAGCGTC---GACGAAAGTAGGCAGAGCAA 276231 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 ||||| || ||||| |||| ||||||| | || ||||||| ||||| || || | Sbjct 276232 GAGACGCAAGGTTACAGACAGCAACCTCATCCGGAGCACTGTACTCAATAATCTCGGTGC 276291 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 | | || || || ||||| || | |||||| || || ||| |||| || |||| Sbjct 276292 AGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCAT 276351 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 ||||||| ||||| | || | || ||||| || || | || |||||||| | ||| Sbjct 276352 CCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCA 276409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502069546040