Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8 190 3e-43 seq3 141 1e-28 >seq8 Length=1782630 Score = 190 bits (210), Expect = 3e-43 Identities = 342/498 (69%), Gaps = 9/498 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| ||||||||||| ||| ||| || || || |||||||| |||| ||||| Sbjct 104252 CTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTT 104311 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| ||||| ||| ||| || | ||| || || || || Sbjct 104312 GGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAACAGGCGGTCCGCGACGAACTC 104371 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| |||||| ||| |||| || ||||| || | ||| || || || | Sbjct 104372 GATGTACTGGCACATCAGCTTGGAGTTCATGCCCAGGAGAGCACAGGGCAGAGCGTCAGT 104431 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGTACC 159887 ||| ||||||| |||||| |||| || ||| | || | | || || | | | | Sbjct 104432 CAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTCCTCAACAACCTGCTTGCT 104491 Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| ||| || ||| |||| ||||| || |||||| |||||| || Sbjct 104492 GGGGCGGTTGTTCA------GGTGGGAGAACAACAGGCAGGCGAAGTCGGTGTGCAGACC 104545 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| |||||||||| ||||||||| | | | || || ||||||| |||||| || Sbjct 104546 CTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTT 104605 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| || || | |||| || || || ||||| ||||| || || || Sbjct 104606 GAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCAACGGCAGCGAAAGC 104665 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 ||||| | || | | || | | | |||| ||| ||||| | ||||||| || || Sbjct 104666 AACGAGACGCTGAGCGAAGGTAGATTCCCTGTCCTGGATCCACTTGATGGCCCAATCGGC 104725 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| || ||||| || Sbjct 104726 CTTCTTGGCAATGCAGGG 104743 >seq3 Length=2393285 Score = 141 bits (156), Expect = 1e-28 Identities = 456/692 (66%), Gaps = 22/692 (3%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACATGC 203897 || ||| || |||||||| |||| | || | |||| | | | ||| |||||||||| Sbjct 275312 CTGGTCGACGGTGAACTGGATGG-GCGCAGAGGCGGCCATTGTGCGCAGGTAGTACATGC 275370 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || ||| ||| ||| ||| | ||||||| | | |||| || | ||| Sbjct 275371 CCGTCTTCAGACCCATCTTCCAACCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGG 275430 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 | || || ||| ||||| || ||||| ||||| ||||| | | || || |||| Sbjct 275431 GCTCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAATGAACGCACCACGGTCCGCGG 275490 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTG 204076 |||| | | || || ||| || |||||||||||||||||| ||| || || || || Sbjct 275491 CCATCTGCAGGATCGTGCGCTGGGAGATCTCCCACACCGTCTTGTACAGCGCCT-TGATG 275549 Query 204077 TGT-TGAGGCACATCTTCCC-ACGTCCTGATCG-AGCCGTTGTCGGCCATCAGTCTCATC 204133 | || || || || | || ||| || | || || || || | | || Sbjct 275550 TCACTGGGG---ATGTTGGGGATGTTCTGGACGGAACCACCCTCAGCAATGATGCGGTTC 275606 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | ||| ||||| ||| | || ||| ||| || ||| |||||||| Sbjct 275607 TTCATGTTGTCCGACCACAGGCCGAGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACC 275666 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | || || | |||| | | | |||| |||| | || ||||| Sbjct 275667 ACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAG 275726 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||| ||| || |||||| ||| ||||| |||||||||||||| | |||| | Sbjct 275727 CACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGAGCGACCAGCAAG 275786 Query 204314 GAGTTGCGCACACCGTATTTTTG--GACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCG 204371 |||||| ||||| | | | | || | || ||| || ||| |||||| | Sbjct 275787 CTGTTGCGGACACC--AGTCTGGGCGATCTTGGCCTTGAGGGAGTCCCAGTCCCAGAGGT 275844 Query 204372 CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 || |||| | | ||||||||||| |||||| ||| || || ||| || |||| Sbjct 275845 CAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGGATACCCTGGGAGACAGGAGATCCCT 275904 Query 204432 TGTACGTCGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCA---TGGCG 204487 ||| ||| |||| | || ||| | || || | ||||||||| || ||| Sbjct 275905 CGTAGGTCTCGTAAGTTCCGA-ACTCCTTGGCAAGATCAGACGAGGCGGTCAAACCAGCG 275963 Query 204488 TGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 || ||| |||||||| |||||||| | ||| Sbjct 275964 TG---GTAGATGGTCTCGAAGATCTGGATGTT 275992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795148550514640