Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 seq1 100 3e-16 seq2 89.7 6e-13 >seq3 Length=2393285 Score = 114 bits (126), Expect = 1e-20 Identities = 169/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| || || || | | ||| | |||||| |||| || |||||||| ||||| |||| Sbjct 1619066 ATTAGTTTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGT 1619125 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 ||||||| || || || | || || |||||||| || ||||| || | |||||||| | Sbjct 1619126 AGTCGGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGAT 1619185 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GC 46535 | | || | || |||||| || ||||| ||||||| | | | || || || Sbjct 1619186 CCGGGGGAATGCCCTCCTTATCTTGAATCTTGTTCTTGACGTTATCAATGGTATCCGAGC 1619245 Query 46536 TCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| ||| || || ||||| || || || || || ||||| ||||| Sbjct 1619246 TC---TCCACCTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||||||||| | || || | || || | |||||| || || || Sbjct 1619338 TCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAG 1619397 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||| | || | || |||||||| ||||| |||| | | Sbjct 1619398 ATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTA 1619457 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||||| || |||| ||||| || |||||||| || ||||| || Sbjct 1619458 TCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACG 1619517 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 1619518 AAGATCTGCAT 1619528 Score = 93.3 bits (102), Expect = 5e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| || || || || | || || |||||||| || ||||| Sbjct 1619566 TCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAG 1619625 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||||| || | | |||||||||| ||||| |||| | | Sbjct 1619626 ATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTG 1619685 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | |||||||| || || ||||| || || || Sbjct 1619686 TCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 1619744 >seq1 Length=3905891 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || || |||||||| || ||||| | Sbjct 455430 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 455489 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | |||||||| || | || | | |||||||||| |||||| |||||| ||| | Sbjct 455490 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 455548 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || ||||| || || || || Sbjct 455549 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 455608 Query 46583 AA 46584 || Sbjct 455609 AA 455610 >seq2 Length=2822020 Score = 89.7 bits (98), Expect = 6e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||| || ||||| || |||| || Sbjct 1631937 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTC 1631878 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||||||| || ||||| |||| ||||||||||| | || | | ||||||||| Sbjct 1631877 GAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 1631821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565233673193880