Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 1e-12 >seq3 Length=2393285 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 ||||| || | ||| || |||| |||| |||||| || || || || || || |||| Sbjct 1619074 CCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGG-- 1619131 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 | | || ||| |||| |||| || || || | || || | |||||||||||||| || Sbjct 1619132 AGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGG 1619191 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | | ||| || || || || || | || | | | | || || | ||| |||| Sbjct 1619192 GAATGCCCTCCTTATCTTGAATCTTGTTCTTGACGTTATCAATGGTATCCGAGCTCTCCA 1619251 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||| ||||| || || || || | ||| || |||||||||||||| Sbjct 1619252 CCTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| || || || || || |||| ||| || |||| ||||| || || || |||| Sbjct 1619337 TTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCAAA 1619396 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 || ||||||||||| |||| ||| | |||||| ||||| || || |||| | Sbjct 1619397 GATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTT 1619456 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | ||||| | ||| || ||||| || || || || ||||| | |||||| || Sbjct 1619457 ATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGAC 1619516 Query 39708 GAAGATCTGCAT 39719 |||||||||||| Sbjct 1619517 GAAGATCTGCAT 1619528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347366767743677