Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8 170 2e-37 seq1 118 1e-21 seq3 109 5e-19 >seq8 Length=1782630 Score = 170 bits (188), Expect = 2e-37 Identities = 351/516 (68%), Gaps = 12/516 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || || |||||| ||||| || || || || || ||| | Sbjct 104219 CATGACACCAGCCTTCTGGTAGTCACCCACCCGCTTCTCGAAGAAGTTGGTCTTACCCGC 104278 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 || || || | ||| || || |||||||||| | |||||||| ||| | |||| Sbjct 104279 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 104338 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || || | || | ||| | ||| || |||||||||||||| || |||| | | | Sbjct 104339 GA---GGGCCACCAACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTGGA 104395 Query 132768 ATTAAGTCCCAGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | ||||| ||| |||| ||||| || || || || || ||||| ||| ||| Sbjct 104396 GTTCATGCCCAGGAGA-GCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGA 104454 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||| || ||| ||| ||| | | ||| || || | || || || Sbjct 104455 CGGCCTCGACGATGATGTCCTCAACAACCTGCTTGCTGGGGCGGTTGTTCAGGTGGGAGA 104514 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| || ||| || |||||| |||| |||||||| | || ||||| |||||| || Sbjct 104515 ACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGA 104574 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | |||| || |||||||| || || || |||||||| || |||| ||||| || | Sbjct 104575 AGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGG 104634 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT--C 133064 | ||||| | ||||| ||||| |||||||| || || |||| |||| || | || | Sbjct 104635 AGAAGAAAATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCCC 104694 Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | | ||| |||||| | ||||| |||||||| Sbjct 104695 TGTCCTG--GATCCACTTGATGGCCCAATCGGCCTT 104728 >seq1 Length=3905891 Score = 118 bits (130), Expect = 1e-21 Identities = 138/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||| ||| ||||||||||| | | ||||| | | Sbjct 455610 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 455551 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| || ||| | || || ||||| | Sbjct 455550 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTC 455493 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||||| || || | |||||||| | ||||||||||||||| | Sbjct 455492 TTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 455433 Query 38431 AGG 38433 ||| Sbjct 455432 AGG 455430 >seq3 Length=2393285 Score = 109 bits (120), Expect = 5e-19 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || || || | || || ||| | | Sbjct 1619300 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 1619241 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | ||||| || || | || || ||||| |||||| | || | Sbjct 1619240 GATACCATTGATAACG--TCAAGAACAAGATTCAAGATAAGGAGGGCATTCCCCCGGATC 1619183 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || |||||||| || | || || ||| |||||||| Sbjct 1619182 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGACGTACGCTCTCCGACTACA 1619123 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||| || ||||| ||||||| ||| | | ||||| Sbjct 1619122 ACATCCAGAAGGAGAGC-ACTCTGCACCTGGTGCTCCGTCTCCGTGGCGG 1619074 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || || || || || ||||||||| | || || ||| | | |||| Sbjct 1619749 TAGTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACTA 1619690 Query 38311 TGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 | | || | | |||| || || | ||||| ||||| || || ||||||| ||||| Sbjct 1619689 TCGACAATG--TGAAGACTAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCG 1619632 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 ||||| | |||||| || |||||||| || | || ||||| |||||||||||||| Sbjct 1619631 TCTCATCTTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCA 1619572 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| | || || || | || || ||| || | || || Sbjct 1619571 AAAGGAATCCACTCTTCACCTCGTCCTTCGTCTGCGTGGTGG 1619530 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| ||||||||| |||| |||||| | | ||| | | | | | |||| Sbjct 1620035 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGATACCATCGACAATGTTAAGA 1619976 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| || || ||||| || || ||||||| || || || || | ||| || | Sbjct 1619975 CCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAACGTCTGATCTTCGCTGGAA 1619916 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 | |||||||| || | |||||||| | |||||||||||||| ||||| Sbjct 1619915 AGCAGCTGGAGGATGGCCGCACCCTTAGTGACTACAACATCCAGAAGGA 1619867 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || |||||||| || ||||| | || || || | || Sbjct 1619528 ATGCAGATCTTCGTCAAAACTCTTACGGGCAAGACGATCACATTGGAAGTTGAATCTTCC 1619469 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| || || | ||||| || || |||||| | ||||| Sbjct 1619468 GACACCATCGATAACG-TTAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCGGACCA 1619410 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | || || || ||| |||| || | || ||| | ||||||||| Sbjct 1619409 GCAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 1619350 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || |||||| |||| || || | || || ||| Sbjct 1619349 CATTCAGAAGGAATCGACCCTTCACCTTGTCCTTCGT 1619313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168617304960