Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 seq8 93.3 5e-14 >seq3 Length=2393285 Score = 158 bits (174), Expect = 1e-33 Identities = 571/892 (64%), Gaps = 66/892 (7%) Strand=Plus/Plus Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 || || ||||| ||||||| | | ||||||| | ||| || || || | |||||| Sbjct 276243 TTACAGACAGCAACCTCATCCGGAGCACTGTACTCAATAATCTCGGTGCAGAGGTTGGAG 276302 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || || || | ||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct 276303 CTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGC 276362 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCG-- 106654 ||| |||| | || ||||| ||||| | || ||||| || | ||||| | || | | Sbjct 276363 ATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCACAGCTTCTGAGCC 276422 Query 106655 --GCTGGTACAATGGCGTTGGCC--------CGTCCCT---------------------- 106682 | |||||| | ||| |||| | | ||| Sbjct 276423 TTGATGGTACGACGGCCACGGCCTTCCTTCTCATACCTGCAATACTATTAGCATGGGTCG 276482 Query 106683 ------------CCGCC--TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC 106728 ||| | | ||||| |||||| || || ||||| ||||| | Sbjct 276483 CGAATACGCGGACCGGCAAACTTACTTCTCGTAGAGAGCGTCGAACTCATCACCGTAGAC 276542 Query 106729 GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAAC 106788 || | | || || || | || || ||||| |||| ||| | ||| | ||||||| Sbjct 276543 ATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTCCAGTCACCGTTCGCCTCAAC 276602 Query 106789 CCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCT 106847 ||||||||||| || || || ||||||||| | || ||||| | | | || ||| Sbjct 276603 ACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGGGCTCTGA-CCT 276661 Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907 | || | ||| ||||| || | || |||||||| | || ||||| |||||| |||| Sbjct 276662 CCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGAAGACATCCGAGTGCCAGGGCT 276721 Query 106908 CAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCG 106961 |||| |||| |||| || || ||||| ||| | || | || || | | Sbjct 276722 CAAGGTAGATGGCGAAAGCACC---GGGACGCTTGTTGCCACCCTGGTCAACGTATCTGG 276778 Query 106962 CTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCC 107021 | ||| ||| || || |||||||| |||| || ||| | || ||| || || || | Sbjct 276779 CAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCAC 276838 Query 107022 GAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACT 107081 ||| || | | | | | || | || || || ||||| || ||| || Sbjct 276839 CAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCT 276898 Query 107082 TTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTT 107139 | ||||| | ||||| | | | | ||||| | |||||||||| || ||||||||| Sbjct 276899 TGGAGATCATAGCGCA-AGT-CTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTT 276956 Query 107140 GTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGT 107199 || ||| ||||||||| || | ||| || || |||||||| ||||| || || Sbjct 276957 CATGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGT 277016 Query 107200 TGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAAT 107258 || | |||||| |||| ||| | || |||||| || ||| ||||| | | | | Sbjct 277017 CGGGGAGGCGTGAGTGAA-GTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCT 277075 Query 107259 CAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 ||||||| ||||| || || | ||| |||||||| | || || ||||| Sbjct 277076 CAATGTCGCTGCCGTGAATACCAACGGCAACACGCATCAGCAGGTGCTGGGG 277127 >seq8 Length=1782630 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| || || || || || || || |||||| || || ||||||||||| Sbjct 104537 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACC 104596 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | ||| || ||||||||||| |||||||| || Sbjct 104597 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCAACGGC 104656 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAACCATTTCAT 117461 || || |||| || |||| ||||||| ||| | |||| | ||| || || Sbjct 104657 AGCGAAAGCAACGAGACGCTGAGCGAAGG---TAGATTCCCTGTCCTGGATCCACTTGAT 104713 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||||| | |||||||| |||| || || || Sbjct 104714 GGCCCAATCGGCCTTCTTGGCAATGCAGGGGAC 104746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975866285560