Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3 105 4e-18 >seq3 Length=2393285 Score = 105 bits (116), Expect = 4e-18 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||| ||||| ||||| || || | ||| |||| ||| Sbjct 1619092 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTCC 1619151 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || ||||| || | || | |||||||| || | Sbjct 1619152 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGA 1619211 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| | |||||| |||| || | ||| || ||| || || | || || || Sbjct 1619212 ATCTTGTTCTTGACGT----TATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGT 1619267 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || |||||||||||||| |||||||||||| Sbjct 1619268 CTTGCCGGTGAGAGTCTTCACGAAGATCTGCATA 1619301 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||| || || ||||| ||||| || ||| | || |||| |||||||| Sbjct 1619553 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTG 1619612 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||| || || || || || |||||||| | || | ||||||||||| |||||| Sbjct 1619613 CTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 1619672 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 || || || | ||||| ||| | ||| || || | ||| ||||| |||| Sbjct 1619673 AGTCTTCAC--AT--TGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTC 1619728 Query 34954 CCGTGAGAGTCTTCAC 34969 | || || ||||| || Sbjct 1619729 CGGTCAGGGTCTTGAC 1619744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630953120232