Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 2e-11 >seq21 Length=600870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/187 (72%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 52010 GAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGC 52069 |||| |||| |||||| | ||||||| ||| | || |||| || |||||||| || Sbjct 170974 GAAGTTCGTGAAGGTGCGCATGAGGACGACCAAGATTCCCCAGATTGGAGACAAGTTCGC 170915 Query 52070 GTCGT-TCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGACC--CAGGAGGACATGCC 52126 || |||||| |||||||| || ||| | || ||| ||||| |||||||| Sbjct 170914 CTCTCGTCACGGA-CAAAAGGGTACCATCGGTATCA--CTTACCGCCAGGAAGACATGCC 170858 Query 52127 CTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATCAACCCCCACGCCTTTCCATCCA 52185 ||| ||| || ||| ||||| ||||| ||||||||||| |||||| |||| ||| Sbjct 170857 TTTCACTCGGGAGGGTGTG-TGCCCTGACCTGATCATCAACCCTCACGCCATTCCCTCCC 170799 Query 52186 GGATGAC 52192 | ||||| Sbjct 170798 GTATGAC 170792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408614268361937