Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_018285.1 Length=40758 Score E Sequences producing significant alignments: (Bits) Value seq369 114 3e-21 seq471 96.9 9e-16 >seq369 Length=814 Score = 114 bits (126), Expect = 3e-21 Identities = 122/158 (77%), Gaps = 5/158 (3%) Strand=Plus/Plus Query 24225 TTAAACCCCTCTAATAAGCCCATAGCACGATTTTAGAATAAGGGTGGTATAA--TAACCT 24282 |||||||| ||||| ||||| |||||||||||||||| | ||||||||||| || ||| Sbjct 654 TTAAACCC-TCTAACAAGCCTGTAGCACGATTTTAGAACAGGGGTGGTATAAATTACCCT 712 Query 24283 CAAGACGATTTAAAATTGAcccccgccccccTCTCGTGCC--AAGGAGAGCCGCCACAAG 24340 | | ||||||||||||| | ||||||| || | | | || | ||| |||| | ||||| Sbjct 713 CGACACGATTTAAAATTAATCCCCGCCTCCTTATATTTCCGTATGGAAAGCCACGACAAG 772 Query 24341 GTGTTCTTTTATGTCGGATACCAATTTTTCAGATTTTT 24378 |||| || | ||| || |||||||| || ||||| Sbjct 773 GTGTCTCCTTGTATCGCATGCCAATTTTCAAGTTTTTT 810 >seq471 Length=578 Score = 96.9 bits (106), Expect = 9e-16 Identities = 136/186 (73%), Gaps = 10/186 (5%) Strand=Plus/Plus Query 24209 AAAAAAGAGGACGTTGTTAAACCCCTCTAATAAGCCCATAGCACGATTTTAGAATAAGGG 24268 |||| |||| |||| || | ||||||| | |||||||||||||||||||| | || Sbjct 263 AAAAGAGAGAACGTCCATAGAGGCCTCTAAAACGCCCATAGCACGATTTTAGAGCATAGG 322 Query 24269 TGGTATAA--TAACCTCAAGACGATTTAAAATTGAcccccgcccc-ccTCT---CGTGCC 24322 |||||||| || ||| | | || ||||||||| |||||||| | | |||| Sbjct 323 TGGTATAATTTACCCTAGTGGCTATCTAAAATTGATACCCGCCCCTTATATGGGCGTG-- 380 Query 24323 AAGGAGAGCCGCCACAAGGTGTTCTTTTATGTCGGATACCAATTTTTC-AGATTTTTAAA 24381 |||||||| | ||||||| | | || | || ||||||||||||| || |||||| | Sbjct 381 -TGGAGAGCCACGACAAGGTATCTTCTTGTATCACATACCAATTTTTCAAGTTTTTTATA 439 Query 24382 GGGTGT 24387 ||||| Sbjct 440 AGGTGT 445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130302964816160