Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq3 141 7e-29 >seq3 Length=2393285 Score = 141 bits (156), Expect = 7e-29 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| ||||| || || || ||||| |||| | || | | |||| ||||| ||| Sbjct 1619326 TGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGC 1619385 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| ||||||||||| || || || ||||||||||| || |||||||| || Sbjct 1619386 TTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTG 1619445 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | ||| ||||| | |||| ||| ||||| || Sbjct 1619446 GTCTTAACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTA 1619505 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | |||||| || || |||||||| Sbjct 1619506 AGAGTTTTGACGAAGATCTGCAT 1619528 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338 || || || || ||||| |||| || || | |||| |||| |||||||| || || Sbjct 1619110 TCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAG 1619169 Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 || | |||||| ||||| || |||||||| || ||||||||||| || | || || | Sbjct 1619170 ATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGAATCTTGTTCTTGACGTTA 1619229 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | || || || | ||||| || || || | ||| |||||||| | ||| || || Sbjct 1619230 TCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCACG 1619289 Query 101459 AATATCTGCAT 101469 || |||||||| Sbjct 1619290 AAGATCTGCAT 1619300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275168968833