Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 174 3e-38 seq8 123 5e-23 >seq3 Length=2393285 Score = 174 bits (192), Expect = 3e-38 Identities = 463/696 (67%), Gaps = 20/696 (3%) Strand=Plus/Plus Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 ||| ||||| ||| |||| |||||||| | || ||| ||| || | ||| Sbjct 276513 GTAGAGAGC--GTCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGG 276570 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 || | |||| |||||| ||| | | || | || |||||| || |||||| ||||| Sbjct 276571 CAGAACAGAGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCAC 276630 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGAT 222119 || || | || ||||| | || | ||| ||||||| |||| ||| || | |||| Sbjct 276631 AGGGCGTAGAACAGATCACGGG--CTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGAT 276688 Query 222120 CCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTC 222179 ||| ||||| || | || | |||||| ||||| || |||| ||| | ||| ||||| | Sbjct 276689 CCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCGGGAC 276748 Query 222180 GCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGT 222238 |||||||||||||||| || || || ||| | |||||||| ||||| | || Sbjct 276749 GCTTGTTGCCACCCTGGTCAACGTATCT-GGCAGTGTTGTTGAAGACACGAAGCATAGGA 276807 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 || || |||||||| ||||||||| || |||||| | ||| | || | Sbjct 276808 ACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGG---AGCCAGTAGAACGGATG 276864 Query 222299 CTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 | | ||| || |||||||||||||| || |||||||| ||||| |||| ||| Sbjct 276865 CGGTGCACGTTCAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCAGA 276924 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 ||||| ||| || || || ||||||||| | || | || || ||||| | | | Sbjct 276925 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGC 276984 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 || | | || | || ||||| ||||| || || |||||| || ||||| | | Sbjct 276985 TGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGA 277044 Query 222476 GACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCG 222535 ||||||| | ||| ||||| | | | | | |||| | |||||||| | ||| Sbjct 277045 GACATCAAGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGAATACCAACGGCA 277104 Query 222536 CATCTCATGTACATGTACTGGGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGG 222592 | ||| || || |||||| | || |||| || || || | | |||||| Sbjct 277105 ACACGCATCAGCAGGTGCTGGGGACGCTCAGCCACCTTTCCGTT-GATCCG--CAGCAGG 277161 Query 222593 TACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTG 222628 || || |||| ||||||||| || ||| ||||| Sbjct 277162 TATGACCGCTCCAAAGTCTTGAAACCGAAGAAGTTG 277197 >seq8 Length=1782630 Score = 123 bits (136), Expect = 5e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||||| ||||||||| | | ||| | |||| || | |||| || || || || Sbjct 104719 TGGGCCATCAAGTGGATCCAG-GACAGGGAATCTACCTTCGCTCAGCGTCTCGTTGCTTT 104661 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||||| || ||||| || || ||| |||||| || || ||||||||||||||||| | Sbjct 104660 CGCTGCCGTTGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAA 104601 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || |||||| || ||| ||| ||||||||||||||| | ||||||||||| Sbjct 104600 GCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCT 104541 Query 26013 CCACAGAGATTTTGCCTGCCTG 26034 |||| || || ||||||||| Sbjct 104540 GCACACCGACTTCGCCTGCCTG 104519 Score = 102 bits (112), Expect = 2e-16 Identities = 166/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||||||||| ||||||||||| Sbjct 105132 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGATCTT 105073 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| || ||| ||| | ||| || | | ||||||| | || || Sbjct 105072 TCCAAGGATTTGCACGATTGGCACAACCGC-CTGAACGACGACGAGCGCTACTTCATCTC 105014 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || ||||| ||||| || || |||||||| || |||| | Sbjct 105013 CCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTCGTCGAGCG 104954 Query 25653 ATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || || || | | ||||| || ||||||||||||||||| Sbjct 104953 CTTCAGCGGCGAGGTCCAGGTTCCT-GAGGCTCGTTGCTTCTACGGTTTCCAGAT 104900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928837032535360