Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 3e-12 >seq3 Length=2393285 Score = 87.8 bits (96), Expect = 3e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || || || || || | || | || ||||| || ||||||||||| || || | Sbjct 1619346 AATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACG 1619405 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| || || || ||||| || ||||| || || | || || ||| || || Sbjct 1619406 CTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGT 1619465 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || || ||||| ||||| | || || || || || || | ||||| | ||| ||||| Sbjct 1619466 GTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACGAAGATCTG 1619525 Query 172067 CAT 172069 ||| Sbjct 1619526 CAT 1619528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905128430800200