Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq8 167 3e-35 seq12 132 6e-25 seq16 131 2e-24 seq3 118 1e-20 >seq8 Length=1782630 Score = 167 bits (184), Expect = 3e-35 Identities = 182/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || ||||| ||| |||||| ||||||||||| ||| | ||||||||| Sbjct 104229 GCCTTCTGGTAGTCACCCACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATC 104288 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 104289 GACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 104348 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||||||||| ||||| |||||||||||||||||||| || || ||||||||| | | Sbjct 104349 AACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTGGAGTTCATGCCCAGG 104408 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | || ||| ||||| | ||| || ||||||||||||||||| Sbjct 104409 AGAGCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATG 104468 Query 868931 AT 868932 || Sbjct 104469 AT 104470 Score = 118 bits (130), Expect = 1e-20 Identities = 178/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | || ||| Sbjct 104879 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCAGGAACCTGG 104938 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||| ||| ||| ||||| Sbjct 104939 ACCTCGCCGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAG 104998 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || || ||||| ||| |||| ||||||||||||| | | ||| ||| | | Sbjct 104999 AACGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAATCG 105058 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | || || | ||||||||||||||||| |||||||||||||| ||| Sbjct 105059 TGCAAATCCTTGGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 105118 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 105119 TACATCTGCCA 105129 Score = 98.7 bits (108), Expect = 1e-14 Identities = 141/195 (72%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| || || |||||||| || ||||| Sbjct 104543 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTT 104602 Query 869239 CTTGAGCCAAAAGATG---GCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 869295 ||||||||| |||||| ||| || || || ||||| || || ||||| ||||| || Sbjct 104603 CTTGAGCCAGAAGATGGAAGCGAAGGAA---CCGGAGAAGAAAATACCCTCAACGGCAGC 104659 Query 869296 AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 || | | ||| |||| || ||| || || |||| | | ||||||||| || || Sbjct 104660 GAAAGCAACGAGACGCTGAGCGAAG--GTAGATTCCCT-GTCCTGGATCCACTTGATGGC 104716 Query 869356 CCAGTCGGCCTTTTT 869370 ||| |||||||| || Sbjct 104717 CCAATCGGCCTTCTT 104731 >seq12 Length=978095 Score = 132 bits (146), Expect = 6e-25 Identities = 117/146 (80%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||||||||| || || || |||||| |||||||| || | || || || ||| Sbjct 782190 GACAGCATCGGCGGTACCGTCACCTGCGTGATCCGCAACGTCCCCGTCGGTCTGGGTGAG 782131 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| |||||||||||||||||| ||||| |||||| Sbjct 782130 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 782071 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| |||||||| ||| ||| || Sbjct 782070 AAGGGCTTCGAGATCGGCTCCGGCTT 782045 >seq16 Length=775996 Score = 131 bits (144), Expect = 2e-24 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| |||||||||||||| ||| ||| || ||| | || |||||| |||| || ||| Sbjct 184372 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGATGTCGGATGCAAGACTGTCGCAAAC 184431 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || || |||||||||||||||||||||||| || ||| Sbjct 184432 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTTAACATCCAGAACG 184486 >seq3 Length=2393285 Score = 118 bits (130), Expect = 1e-20 Identities = 206/300 (69%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| ||| ||||| || ||||| || || || |||||||| Sbjct 276762 CTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGA 276821 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | | ||||| ||| | | || | |||| || | || Sbjct 276822 GGTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACC 276881 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || ||||||| ||||||||| | ||||| || || ||||||||||| || || Sbjct 276882 GATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGATACCGTC 276941 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| ||||| ||||| || | || || || | || || Sbjct 276942 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTACC 277001 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || || || | || ||||| ||| | | ||||| || |||||| Sbjct 277002 AGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGT 277061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107084298727073