Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 145 7e-30 >seq3 Length=2393285 Score = 145 bits (160), Expect = 7e-30 Identities = 468/715 (65%), Gaps = 25/715 (3%) Strand=Plus/Plus Query 139306 TACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTT- 139364 ||||| |||||||| ||||||| ||||||||| | |||| | | | | ||| Sbjct 276505 TACTTCTCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCA-AGCCAGGGGCTTC 276563 Query 139365 GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGG 139424 || || || | || | ||| | |||||||||| || ||| |||||||||||||||| Sbjct 276564 GTTGGGGCAGAACAGAGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGG 276623 Query 139425 AATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCT--TCCGAACCCATGTTACGT 139482 |||||| ||| | | || ||| || || ||| | || ||| ||| ||| | Sbjct 276624 GGTCCACAGGGCGTAGAACAGATCACGGGC--TCTGACCTCCTCCTTACCGTGGTTC--T 276679 Query 139483 TTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTG 139540 | | | | ||||| || || || || | |||||| || || || |||||||| | | Sbjct 276680 TACGGAGATCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAG 276739 Query 139541 CGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCA 139597 | || || ||| ||||| || || |||| || ||| || ||||| || || | Sbjct 276740 CACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAA 276799 Query 139598 ACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGA 139653 ||| || | |||||| | | || |||||||| | || ||| ||| | || | Sbjct 276800 GCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCCAGT----A 276855 Query 139654 GCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA 139713 | |||| | || || || | ||||| || ||| | ||||| || | | ||||| Sbjct 276856 GAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCAA 276915 Query 139714 TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCAT 139773 | || ||||| ||||| |||||||| |||| ||| ||| || ||||| Sbjct 276916 GTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAA 276975 Query 139774 GACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAAC 139833 || | ||| || || | || || || |||||||| || ||||| ||||| Sbjct 276976 GAGGCAAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAG 277035 Query 139834 ATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATA 139893 | | |||||||| | ||| || |||||||| || |||| || || ||||| ||| Sbjct 277036 TACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGAATA 277095 Query 139894 CCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttttt 139953 || || | || |||||||||| || ||| || || |||||| || | ||| Sbjct 277096 CCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGC 277155 Query 139954 ttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||| || |||| ||| | |||||| | || ||| | | ||||||||||| Sbjct 277156 AGCAGGTATGACCG--CTCCAAAGTCTTGAAACCGAAGAAGTTGTAGTTGAAATC 277208 Score = 132 bits (146), Expect = 4e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || || || || | ||||| ||| | || Sbjct 1619528 ATGCAGATCTTCGTCAAAACTCTTACGGGCAAGACGATCACATTGGAAGTTGAATCTTCC 1619469 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| || || ||| |||||||| ||||| || || || || || Sbjct 1619468 GACACCATCGATAACGTTAAGACCAA-GATTCAAGACAAGGAAGGCATTCCCCCGGACCA 1619410 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || |||||||||||||| || || ||| |||||||| | | | |||| || || || Sbjct 1619409 GCAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 1619350 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 |||||| ||||||||||| || ||| Sbjct 1619349 CATTCAGAAGGAATCGACCCTTCAC 1619325 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || ||||| || || || || || || || || | | ||||| | || | Sbjct 1619741 AAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACTATCGACAAT 1619682 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||| || ||||| || || || |||||||| || || ||| | ||||| Sbjct 1619681 GTGAAGACTAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTCATCTTC 1619622 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || |||||||||||| | | | |||| || || ||||| ||||||||||| Sbjct 1619621 GCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGAATCC 1619562 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| | || | || |||| || || Sbjct 1619561 ACTCTTCACCTCGTCCTTCGTCTGCGTGGTGG 1619530 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || |||||||| || || || | | Sbjct 1619300 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 1619241 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || | ||||| ||||| || || || || || || ||||| Sbjct 1619240 GATACCATTGATAACGTCAAGAACAAGATTCAAGATAAGGAGGGCATTCCCCCGGATCAG 1619181 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || |||||||| ||| | | | || || || ||| Sbjct 1619180 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGACGTACGCTCTCCGACTACAAC 1619121 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || ||| ||||| Sbjct 1619120 ATCCAGAAGGAGAGCACTCTGCACCTGGTG 1619091 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACA 24786 ||||| || || || || ||||| || || | | ||| || | || || | ||| || Sbjct 1620033 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGATACCATCGACAATGTTAAGACC 1619974 Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 || |||||| || || || || || |||||||| || |||||| ||||||| || || || Sbjct 1619973 AA-GATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAACGTCTGATCTTCGCTGGAAA 1619915 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 |||||||||||| | | | | || || ||||| || ||||| || || || || Sbjct 1619914 GCAGCTGGAGGATGGCCGCACCCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCA 1619855 Query 24907 CTTGGTGTTGCGATTGCGCGGAGG 24930 | | || | || |||| || || Sbjct 1619854 CCTCGTTCTCCGCCTGCGTGGTGG 1619831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893837731320