Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3 113 3e-20 seq1 96.9 2e-15 seq2 93.3 3e-14 >seq3 Length=2393285 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||||||||||||| ||||| ||||| || || | || |||| Sbjct 1619089 AGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCT 1619148 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || |||||||| || || ||||| || | || | |||||||| || Sbjct 1619149 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCT 1619208 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || | |||||| | || | || | ||| || || | || || ||| Sbjct 1619209 TGAATCTTGTTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTC 1619268 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || ||||||||||| Sbjct 1619269 TTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||| || ||||| ||||| || ||| | || |||| Sbjct 1619545 AGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCC 1619604 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| |||||||| || || |||||||| | || | ||||||||||| Sbjct 1619605 TCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 1619664 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| ||| | ||| || |||| ||| || Sbjct 1619665 TGAATCTTAGTCTTCAC--AT--TGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGAT 1619720 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||||| || |||||||| || Sbjct 1619721 GGTCTTTCCGGTCAGGGTCTTGAC 1619744 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| |||||||||||||| ||||| || | | | || |||| Sbjct 1619317 AGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCC 1619376 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || ||||||| || |||||||| | || | || |||||||| Sbjct 1619377 TCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC- 1619435 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 || | | || || | | | | ||||||| || | || || || | || || Sbjct 1619436 TTGAATCTTGGTCTTA---ACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGAT 1619492 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || || || || ||||||||||| Sbjct 1619493 CGTCTTGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528 Score = 91.5 bits (100), Expect = 1e-13 Identities = 126/174 (72%), Gaps = 8/174 (5%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| ||| |||| |||| ||||| |||||||| ||||| Sbjct 1619866 CTCCTTCTGGATGTTGTAGTCACTAAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAA 1619925 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| ||||||||||| | || | |||||||| || | || || || || | Sbjct 1619926 GATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTTAAC--A 1619983 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGA 34955 | | ||||| || | | |||||| || | ||| |||||||| || |||| Sbjct 1619984 T--TGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGA 1620035 >seq1 Length=3905891 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| ||| |||| |||| || || ||||| || ||||||| Sbjct 455430 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 455489 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 | || || ||||| || | || | ||||||||||| | || || |||||| Sbjct 455490 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 455549 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | | |||||| || | ||| |||||||| |||||||||||||| || | Sbjct 455550 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 455609 Query 34968 A 34968 | Sbjct 455610 A 455610 >seq2 Length=2822020 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| |||||||| || | || | || Sbjct 1631939 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 1631880 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || ||||||||||| || |||||||| | || | ||||||||||| Sbjct 1631879 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 1631821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690144484111