Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 >seq4 Length=2386931 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 105090 GGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCCGGCGAGCAC 105149 ||||| ||||| ||| ||||||| || | || |||||||||||| ||||| ||| ||| Sbjct 1615587 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 1615646 Query 105150 TTCAA-CCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAAAGGCACGTCGGCGA 105208 ||||| |||| || || | | ||||| ||||| || | || || | |||||||| || Sbjct 1615647 TTCAACCCCTTCG-GCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCACGTCGGTGA 1615705 Query 105209 CCTGGGCAA 105217 ||| || || Sbjct 1615706 CCTTGGTAA 1615714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398873547782941