Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 >seq3 Length=2393285 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || |||||||| |||||||| ||| ||| ||| Sbjct 1619525 CAGATCTTCGTCAAAACTCTTACGGGCAAGACGATCACATTGGAAGTTGAATCTTCCGAC 1619466 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || ||||| ||| |||||| || Sbjct 1619465 ACCATCGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCGGACCAGCAG 1619406 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || || ||||||||||| ||||| | || ||| |||| |||||| | Sbjct 1619405 CGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACATT 1619346 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || ||||||||||| Sbjct 1619345 CAGAAGGAATCGACCCTTCACCTTGT 1619320 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||| || |||| ||||| || || || || | || Sbjct 1619285 AAGACTCTCACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCATTGATAAC 1619226 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| | ||||||||||| || || || ||| ||||| || | || |||||| Sbjct 1619225 GTCAAGAACAAGATTCAAGATAAGGAGGGCATTCCCCCGGATCAGCAGCGTCTCATCTTC 1619166 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| ||||||||||| | || | |||| |||||| ||||||| ||| Sbjct 1619165 GCTGGTAAGCAGCTGGAAGATGGACGTACGCTCTCCGACTACAACATCCAGAAGGAGAGC 1619106 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 1619105 ACTCTGCACCTGGT 1619092 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || ||||| || ||||| | || ||||| ||||||||| |||| Sbjct 1619742 CAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACTATCGACAA 1619683 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || || ||| || | || ||||| Sbjct 1619682 TGTGAAGACTAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTCATCTT 1619623 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| ||||||||| |||| ||||| | || || | || |||||| |||| || || || Sbjct 1619622 CGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGAATC 1619563 Query 206364 TACTCTTCACCTTGT 206378 ||||||||||| || Sbjct 1619562 CACTCTTCACCTCGT 1619548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181810669949149